RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	SOR2	Q07786	357 aa		4.12	□□□□□ -1.75
KTI12	YKL110C	FCY1	Q12178	158 aa		4.12	□□□□□ -1.75
KTI12	YKL110C	YPR071W	Q12346	211 aa		4.12	□□□□□ -1.75
KTI12	YKL110C	BGL2	P15703	313 aa	Known RBP	4.11	□□□□□ -1.75
KTI12	YKL110C	TOM40	P23644	387 aa	Known RBP	4.11	□□□□□ -1.75
KTI12	YKL110C	IES6	P32617	166 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	YBR090C	P38253	122 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	YPT31	P38555	223 aa	Known RBP	4.11	□□□□□ -1.75
KTI12	YKL110C	NOP16	P40007	231 aa	Known RBP	4.11	□□□□□ -1.75
KTI12	YKL110C	HUA1	P40325	198 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	YIL163C	P40448	117 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	MIC27	P50945	234 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	YNR064C	P53750	290 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	DAD3	P69850	94 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	STD1	Q02794	444 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	ARL3	Q02804	198 aa		4.11	□□□□□ -1.75
KTI12	YKL110C	TMC1	Q08422	150 aa	Predicted RBP	4.11	□□□□□ -1.75
KTI12	YKL110C	PIS1	P06197	220 aa	Known RBP	4.1	□□□□□ -1.75
KTI12	YKL110C	NHP6A	P11632	93 aa	Known RBP	4.1	□□□□□ -1.75
KTI12	YKL110C	RNA15	P25299	296 aa	Predicted RBP	4.1	□□□□□ -1.75
KTI12	YKL110C	YCR022C	P25620	114 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	AFR1	P33304	620 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	PMU1	P36069	295 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	PHD1	P36093	366 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	CSH1	P38287	376 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	IMD2	P38697	523 aa	Known RBP	4.1	□□□□□ -1.75
KTI12	YKL110C	YAR068W	P39564	161 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	BDH1	P39714	382 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	LST8	P41318	303 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	NCA3	P46955	337 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	YGR018C	P53211	109 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	YGR151C	P53287	111 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	YNL092W	P53934	400 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	ATC1	Q04005	294 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	LOA1	Q06508	300 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	GEP5	Q12393	293 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	TOR1	P35169	2470 aa		4.1	□□□□□ -1.75
KTI12	YKL110C	MEC1	P38111	2368 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	FMP49	A0A023PZB3	126 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	ADE8	P04161	214 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	RPS2	P25443	254 aa	Known RBP	4.09	□□□□□ -1.75
KTI12	YKL110C	FPR2	P32472	135 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	GPI18	P38211	433 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	YIL012W	P40551	113 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	YIR020C	P40575	100 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	PAU5	P43575	122 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	WWM1	P43582	211 aa	Known RBP	4.09	□□□□□ -1.75
KTI12	YKL110C	SBH2	P52871	88 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	SSU72	P53538	206 aa	Predicted RBP	4.09	□□□□□ -1.75
KTI12	YKL110C	ARR2	Q06597	130 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	MCH1	Q07376	486 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	IRC25	Q07951	179 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	YOP1	Q12402	180 aa		4.09	□□□□□ -1.75
KTI12	YKL110C	URA2	P07259	2214 aa	Known RBP	4.09	□□□□□ -1.76
KTI12	YKL110C	CDC7	P06243	507 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	RPS22A	P0C0W1	130 aa	Known RBP	4.08	□□□□□ -1.76
KTI12	YKL110C	PAU19	P0CE85	124 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	PAU21	P0CE86	164 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	PAU22	P0CE87	164 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	PAU3	P25610	124 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	HMX1	P32339	317 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	SRP21	P32342	167 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	MRPL28	P36527	147 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	HSP10	P38910	106 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	SRP14	P38985	146 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	GPI2	P46961	280 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	CPD1	P53314	239 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	TIM10	P87108	93 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	NAT3	Q06504	195 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	NDE2	Q07500	545 aa		4.08	□□□□□ -1.76
KTI12	YKL110C	PML1	Q07930	204 aa	Predicted RBP	4.08	□□□□□ -1.76
KTI12	YKL110C	PAA1	Q12447	191 aa	Known RBP	4.08	□□□□□ -1.76
KTI12	YKL110C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
KTI12	YKL110C	FRS1	P15624	595 aa	Known RBP	4.07	□□□□□ -1.76
KTI12	YKL110C	CDC43	P18898	376 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	RAD23	P32628	398 aa	Known RBP	4.07	□□□□□ -1.76
KTI12	YKL110C	AVT5	P38176	459 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	LSM2	P38203	95 aa	Known RBP	4.07	□□□□□ -1.76
KTI12	YKL110C	DOG2	P38773	246 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	DOG1	P38774	246 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	SAS2	P40963	338 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	GZF3	P42944	551 aa	Known RBP	4.07	□□□□□ -1.76
KTI12	YKL110C	YGL185C	P53100	379 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	YMR166C	Q03829	368 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	SEN15	Q04675	128 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	ADH6	Q04894	360 aa	Known RBP	4.07	□□□□□ -1.76
KTI12	YKL110C	IRC23	Q08416	157 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	FIT2	Q08906	153 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	JID1	Q12350	301 aa		4.07	□□□□□ -1.76
KTI12	YKL110C	YHR213W	P0CI67	198 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	YGL010W	P25338	174 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	VMA11	P32842	164 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	DUT1	P33317	147 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	SSS1	P35179	80 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	DAD2	P36162	133 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	YBL071C	P38185	102 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	CDS1	P38221	457 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	GLE2	P40066	365 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	CYB5	P40312	120 aa		4.06	□□□□□ -1.76
KTI12	YKL110C	TOM7	P53507	60 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms