RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W INO2P26798 304 aa4.19□□□□□ -1.74
CBF1YJR060W PDC2P32896 925 aa4.19□□□□□ -1.74
CBF1YJR060W SLM6P38343 150 aa4.19□□□□□ -1.74
CBF1YJR060W SIM1P40472 476 aa4.19□□□□□ -1.74
CBF1YJR060W LST8P41318 303 aa4.19□□□□□ -1.74
CBF1YJR060W BER1Q06688 274 aaKnown RBP4.19□□□□□ -1.74
CBF1YJR060W RRT7Q07829 113 aa4.19□□□□□ -1.74
CBF1YJR060W YPL264CQ08980 353 aa4.19□□□□□ -1.74
CBF1YJR060W YPS3Q12303 508 aa4.19□□□□□ -1.74
CBF1YJR060W YOP1Q12402 180 aa4.19□□□□□ -1.74
CBF1YJR060W YHR213W-AQ8TGT4 77 aa4.19□□□□□ -1.74
CBF1YJR060W RIB5P38145 238 aa4.18□□□□□ -1.74
CBF1YJR060W YEA6P39953 335 aa4.18□□□□□ -1.74
CBF1YJR060W NSA2P40078 261 aaKnown RBP4.18□□□□□ -1.74
CBF1YJR060W YER137CP40083 148 aaKnown RBP4.18□□□□□ -1.74
CBF1YJR060W COX15P40086 486 aa4.18□□□□□ -1.74
CBF1YJR060W MRPL50P53724 139 aa4.18□□□□□ -1.74
CBF1YJR060W CAF40P53829 373 aa4.18□□□□□ -1.74
CBF1YJR060W PDR17P53844 350 aa4.18□□□□□ -1.74
CBF1YJR060W DID2P69771 204 aa4.18□□□□□ -1.74
CBF1YJR060W YLR179CQ06252 201 aaKnown RBP4.18□□□□□ -1.74
CBF1YJR060W FRQ1Q06389 190 aa4.18□□□□□ -1.74
CBF1YJR060W MAG1P22134 296 aaKnown RBP4.17□□□□□ -1.74
CBF1YJR060W MRPL38P35996 138 aaPredicted RBP4.17□□□□□ -1.74
CBF1YJR060W YBL071CP38185 102 aa4.17□□□□□ -1.74
CBF1YJR060W VPS55P47111 140 aa4.17□□□□□ -1.74
CBF1YJR060W DYN2Q02647 92 aa4.17□□□□□ -1.74
CBF1YJR060W EST3Q03096 181 aa4.17□□□□□ -1.74
CBF1YJR060W YMR181CQ03231 154 aa4.17□□□□□ -1.74
CBF1YJR060W FCF2Q12035 217 aaPredicted RBP4.17□□□□□ -1.74
CBF1YJR060W AGC1Q12482 902 aa4.17□□□□□ -1.74
CBF1YJR060W YDR157WA0A023PZE8 133 aa4.16□□□□□ -1.74
CBF1YJR060W MRS3P10566 314 aa4.16□□□□□ -1.74
CBF1YJR060W URA5P13298 226 aaKnown RBP4.16□□□□□ -1.74
CBF1YJR060W FCY2P17064 533 aa4.16□□□□□ -1.74
CBF1YJR060W YCR043CP25361 127 aa4.16□□□□□ -1.74
CBF1YJR060W YPS1P32329 569 aa4.16□□□□□ -1.74
CBF1YJR060W YKR045CP36138 183 aa4.16□□□□□ -1.74
CBF1YJR060W RRT1P38192 103 aa4.16□□□□□ -1.74
CBF1YJR060W YPT31P38555 223 aaKnown RBP4.16□□□□□ -1.74
CBF1YJR060W YNL194CP40169 301 aa4.16□□□□□ -1.74
CBF1YJR060W TOS8P53147 276 aa4.16□□□□□ -1.74
CBF1YJR060W CRH1P53301 507 aa4.16□□□□□ -1.74
CBF1YJR060W CAB4P53332 305 aa4.16□□□□□ -1.74
CBF1YJR060W YMR082CQ04276 118 aa4.16□□□□□ -1.74
CBF1YJR060W PBP4Q07362 185 aaKnown RBP4.16□□□□□ -1.74
CBF1YJR060W AYT1Q12226 474 aa4.16□□□□□ -1.74
CBF1YJR060W PAA1Q12447 191 aaKnown RBP4.16□□□□□ -1.74
CBF1YJR060W COA2Q3E823 68 aa4.16□□□□□ -1.74
CBF1YJR060W SOD1P00445 154 aaKnown RBP4.15□□□□□ -1.75
CBF1YJR060W PET494P07390 489 aaPredicted RBP4.15□□□□□ -1.75
CBF1YJR060W UBI4P0CG63 381 aaKnown RBP4.15□□□□□ -1.75
CBF1YJR060W STF2P16965 84 aa4.15□□□□□ -1.75
CBF1YJR060W ACP1P32463 125 aa4.15□□□□□ -1.75
CBF1YJR060W FPR2P32472 135 aa4.15□□□□□ -1.75
CBF1YJR060W TOA2P32774 122 aa4.15□□□□□ -1.75
CBF1YJR060W DOG2P38773 246 aa4.15□□□□□ -1.75
CBF1YJR060W DOG1P38774 246 aa4.15□□□□□ -1.75
CBF1YJR060W LOC1P43586 204 aaPredicted RBP4.15□□□□□ -1.75
CBF1YJR060W RPA43P46669 326 aa4.15□□□□□ -1.75
CBF1YJR060W RIB4P50861 169 aaPredicted RBP4.15□□□□□ -1.75
CBF1YJR060W HCH1P53834 153 aa4.15□□□□□ -1.75
CBF1YJR060W MRPS17Q03246 237 aaPredicted RBP4.15□□□□□ -1.75
CBF1YJR060W ANT1Q06497 328 aa4.15□□□□□ -1.75
CBF1YJR060W PRM3Q08931 133 aa4.15□□□□□ -1.75
CBF1YJR060W RPL18AP0CX49 186 aaKnown RBP4.14□□□□□ -1.75
CBF1YJR060W RPL18BP0CX50 186 aaKnown RBP4.14□□□□□ -1.75
CBF1YJR060W MRS4P23500 304 aa4.14□□□□□ -1.75
CBF1YJR060W SHB17P36136 271 aaKnown RBP4.14□□□□□ -1.75
CBF1YJR060W SRL3P36167 246 aa4.14□□□□□ -1.75
CBF1YJR060W ASP1P38986 381 aaPredicted RBP4.14□□□□□ -1.75
CBF1YJR060W YAR068WP39564 161 aa4.14□□□□□ -1.75
CBF1YJR060W GCV3P39726 170 aaPredicted RBP4.14□□□□□ -1.75
CBF1YJR060W YEA4P40004 342 aa4.14□□□□□ -1.75
CBF1YJR060W RPR2P40571 144 aa4.14□□□□□ -1.75
CBF1YJR060W AGX1P43567 385 aa4.14□□□□□ -1.75
CBF1YJR060W WWM1P43582 211 aaKnown RBP4.14□□□□□ -1.75
CBF1YJR060W YJR111CP47148 283 aaKnown RBP4.14□□□□□ -1.75
CBF1YJR060W YGR219WP53307 113 aa4.14□□□□□ -1.75
CBF1YJR060W RRG8Q06109 277 aa4.14□□□□□ -1.75
CBF1YJR060W COX2P00410 251 aa4.13□□□□□ -1.75
CBF1YJR060W RPS25BP0C0T4 108 aaKnown RBP4.13□□□□□ -1.75
CBF1YJR060W CPR1P14832 162 aaKnown RBP4.13□□□□□ -1.75
CBF1YJR060W QCR9P22289 66 aa4.13□□□□□ -1.75
CBF1YJR060W UTR5P32630 166 aa4.13□□□□□ -1.75
CBF1YJR060W MIX23P38162 196 aa4.13□□□□□ -1.75
CBF1YJR060W MIC12P38341 106 aa4.13□□□□□ -1.75
CBF1YJR060W YBR292CP38357 123 aa4.13□□□□□ -1.75
CBF1YJR060W YPI1P43587 155 aa4.13□□□□□ -1.75
CBF1YJR060W FIP1P45976 327 aa4.13□□□□□ -1.75
CBF1YJR060W JAC1P53193 184 aa4.13□□□□□ -1.75
CBF1YJR060W CPD1P53314 239 aa4.13□□□□□ -1.75
CBF1YJR060W YHP1Q04116 353 aa4.13□□□□□ -1.75
CBF1YJR060W SDH7Q04401 133 aa4.13□□□□□ -1.75
CBF1YJR060W POC4Q12245 148 aaPredicted RBP4.13□□□□□ -1.75
CBF1YJR060W PRR2Q12310 699 aa4.13□□□□□ -1.75
CBF1YJR060W RPS25AQ3E792 108 aaPredicted RBP4.13□□□□□ -1.75
CBF1YJR060W BDH1P39714 382 aa4.12□□□□□ -1.75
CBF1YJR060W POR2P40478 281 aa4.12□□□□□ -1.75
CBF1YJR060W YJR015WP47090 510 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms