RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W KIN28P06242 306 aa0.23□□□□□ -2.37
VMA21YGR105W SNO1Q03144 224 aa0.23□□□□□ -2.37
VMA21YGR105W RAD6P06104 172 aa0.22□□□□□ -2.37
VMA21YGR105W YEL073CP39974 107 aa0.22□□□□□ -2.37
VMA21YGR105W YGR269WP40326 108 aa0.22□□□□□ -2.37
VMA21YGR105W CIN5P40917 295 aa0.22□□□□□ -2.37
VMA21YGR105W TTI2P47168 421 aa0.22□□□□□ -2.37
VMA21YGR105W PAC10P48363 199 aa0.22□□□□□ -2.37
VMA21YGR105W YML079WQ03629 201 aa0.22□□□□□ -2.37
VMA21YGR105W SHG1P38337 142 aa0.21□□□□□ -2.38
VMA21YGR105W NVJ1P38881 321 aa0.21□□□□□ -2.38
VMA21YGR105W TIM13P53299 105 aa0.21□□□□□ -2.38
VMA21YGR105W HRD1Q08109 551 aa0.21□□□□□ -2.38
VMA21YGR105W CWC21Q03375 135 aaKnown RBP0.2□□□□□ -2.38
VMA21YGR105W PRM3Q08931 133 aa0.2□□□□□ -2.38
VMA21YGR105W TAF2P23255 1407 aa0.2□□□□□ -2.38
VMA21YGR105W RPS25BP0C0T4 108 aaKnown RBP0.19□□□□□ -2.38
VMA21YGR105W YEL028WP39989 153 aa0.19□□□□□ -2.38
VMA21YGR105W HPT1Q04178 221 aaKnown RBP0.19□□□□□ -2.38
VMA21YGR105W RPS25AQ3E792 108 aaPredicted RBP0.19□□□□□ -2.38
VMA21YGR105W ROM2P51862 1356 aaKnown RBP0.19□□□□□ -2.38
VMA21YGR105W SPS2P08459 502 aa0.18□□□□□ -2.38
VMA21YGR105W YBR027CP38220 110 aa0.18□□□□□ -2.38
VMA21YGR105W TRM3Q07527 1436 aa0.18□□□□□ -2.38
VMA21YGR105W CSH1P38287 376 aa0.17□□□□□ -2.38
VMA21YGR105W APS3P47064 194 aa0.17□□□□□ -2.38
VMA21YGR105W GEP7P53171 287 aa0.17□□□□□ -2.38
VMA21YGR105W HOP2P53187 214 aa0.17□□□□□ -2.38
VMA21YGR105W NQM1P53228 333 aaPredicted RBP0.17□□□□□ -2.38
VMA21YGR105W YNL122CP53921 115 aaPredicted RBP0.17□□□□□ -2.38
VMA21YGR105W YDL241WQ07738 123 aa0.17□□□□□ -2.38
VMA21YGR105W VAM10Q08474 114 aa0.17□□□□□ -2.38
VMA21YGR105W SYM1Q06563 197 aa0.16□□□□□ -2.38
VMA21YGR105W SPT14P32363 452 aa0.15□□□□□ -2.39
VMA21YGR105W GLR1P41921 483 aaKnown RBP0.15□□□□□ -2.39
VMA21YGR105W MGR2Q02889 113 aa0.15□□□□□ -2.39
VMA21YGR105W CMC4Q3E7A9 73 aa0.15□□□□□ -2.39
VMA21YGR105W CCC1P47818 322 aa0.14□□□□□ -2.39
VMA21YGR105W LIP1Q03579 150 aa0.14□□□□□ -2.39
VMA21YGR105W YET3Q07451 203 aa0.14□□□□□ -2.39
VMA21YGR105W PEX11Q12462 236 aa0.14□□□□□ -2.39
VMA21YGR105W CDC39P25655 2108 aaKnown RBP0.13□□□□□ -2.39
VMA21YGR105W INO4P13902 151 aa0.13□□□□□ -2.39
VMA21YGR105W YEL014CP39999 101 aa0.13□□□□□ -2.39
VMA21YGR105W UIP4Q08926 304 aa0.13□□□□□ -2.39
VMA21YGR105W HSP150P32478 413 aa0.12□□□□□ -2.39
VMA21YGR105W NUF2P33895 451 aa0.12□□□□□ -2.39
VMA21YGR105W GLC8P41818 229 aa0.12□□□□□ -2.39
VMA21YGR105W XPT1P47165 209 aa0.12□□□□□ -2.39
VMA21YGR105W JAC1P53193 184 aa0.12□□□□□ -2.39
VMA21YGR105W GRE1Q08969 168 aa0.12□□□□□ -2.39
VMA21YGR105W YOR072WQ08486 104 aa0.11□□□□□ -2.39
VMA21YGR105W HAP2P06774 265 aa0.1□□□□□ -2.39
VMA21YGR105W RPS22AP0C0W1 130 aaKnown RBP0.1□□□□□ -2.39
VMA21YGR105W PTC1P35182 281 aa0.1□□□□□ -2.39
VMA21YGR105W YMR141CP40211 102 aa0.1□□□□□ -2.39
VMA21YGR105W THI74Q04083 370 aa0.1□□□□□ -2.39
VMA21YGR105W ATG10Q07879 167 aa0.1□□□□□ -2.39
VMA21YGR105W RPS22BQ3E7Y3 130 aaKnown RBP0.1□□□□□ -2.39
VMA21YGR105W YLR307C-AQ3E825 87 aa0.1□□□□□ -2.39
VMA21YGR105W RPL43AP0CX25 92 aaKnown RBP0.09□□□□□ -2.4
VMA21YGR105W RPL43BP0CX26 92 aa0.09□□□□□ -2.4
VMA21YGR105W UBC6P33296 250 aaPredicted RBP0.09□□□□□ -2.4
VMA21YGR105W PLP1Q04004 230 aa0.09□□□□□ -2.4
VMA21YGR105W YPR114WQ06107 315 aa0.09□□□□□ -2.4
VMA21YGR105W TRR1P29509 319 aaKnown RBP0.08□□□□□ -2.4
VMA21YGR105W ATP7P30902 174 aa0.08□□□□□ -2.4
VMA21YGR105W SRP102P36057 244 aaPredicted RBP0.08□□□□□ -2.4
VMA21YGR105W ECM31P38122 312 aa0.08□□□□□ -2.4
VMA21YGR105W HYP2P23301 157 aaKnown RBP0.07□□□□□ -2.4
VMA21YGR105W ATG8P38182 117 aaRIP-Chip data0.07□□□□□ -2.4not detected
VMA21YGR105W YPT31P38555 223 aaKnown RBP0.07□□□□□ -2.4
VMA21YGR105W YJL009WP47078 108 aa0.07□□□□□ -2.4
VMA21YGR105W SEN15Q04675 128 aa0.07□□□□□ -2.4
VMA21YGR105W IRC21Q04772 201 aa0.07□□□□□ -2.4
VMA21YGR105W ADE6P38972 1358 aaKnown RBP0.06□□□□□ -2.4
VMA21YGR105W CMD1P06787 147 aaKnown RBP0.06□□□□□ -2.4
VMA21YGR105W YGL041W-AP0C5N3 154 aa0.06□□□□□ -2.4
VMA21YGR105W YLR157W-EP0CF00 54 aa0.06□□□□□ -2.4
VMA21YGR105W HTD2P38790 280 aaKnown RBP0.06□□□□□ -2.4
VMA21YGR105W YNL140CP53910 189 aa0.06□□□□□ -2.4
VMA21YGR105W TMA20P89886 181 aaPredicted RBP0.06□□□□□ -2.4
VMA21YGR105W COA6Q3E846 104 aa0.06□□□□□ -2.4
VMA21YGR105W MYO1P08964 1928 aa0.06□□□□□ -2.4
VMA21YGR105W HSL1P34244 1518 aa0.06□□□□□ -2.4
VMA21YGR105W FAS2P19097 1887 aaKnown RBP0.05□□□□□ -2.4
VMA21YGR105W SPA2P23201 1466 aaKnown RBP0.05□□□□□ -2.4
VMA21YGR105W LAA1P39526 2014 aa0.05□□□□□ -2.4
VMA21YGR105W SRL3P36167 246 aa0.05□□□□□ -2.4
VMA21YGR105W YHR140WP38842 239 aa0.05□□□□□ -2.4
VMA21YGR105W IPT1P38954 527 aa0.05□□□□□ -2.4
VMA21YGR105W VMA10P48836 114 aaKnown RBP0.05□□□□□ -2.4
VMA21YGR105W YNR064CP53750 290 aa0.05□□□□□ -2.4
VMA21YGR105W ATP19P81451 68 aa0.05□□□□□ -2.4
VMA21YGR105W FMN1Q03778 218 aa0.05□□□□□ -2.4
VMA21YGR105W YMR321CQ04898 105 aa0.05□□□□□ -2.4
VMA21YGR105W NMA1Q06178 401 aaKnown RBP0.05□□□□□ -2.4
VMA21YGR105W YLR050CQ12155 161 aaKnown RBP0.05□□□□□ -2.4
VMA21YGR105W KTI11Q3E840 82 aa0.05□□□□□ -2.4
VMA21YGR105W YRF1-3P0CX14 1859 aa0.05□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms