RNA–Protein interactions for RNA: YER171W

RAD3, Transcript of 5' to 3' DNA helicase, yeast

Gene RAD3, Length 2,337 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD3	YER171W	LDS2	Q08218	356 aa		4.88	□□□□□ -1.63
RAD3	YER171W	YOR029W	Q12243	111 aa		4.88	□□□□□ -1.63
RAD3	YER171W	RTG1	P32607	177 aa		4.88	□□□□□ -1.63
RAD3	YER171W	AVT5	P38176	459 aa		4.88	□□□□□ -1.63
RAD3	YER171W	TIF11	P38912	153 aa	Known RBP	4.88	□□□□□ -1.63
RAD3	YER171W	ABM1	P47146	123 aa		4.88	□□□□□ -1.63
RAD3	YER171W	SHH3	Q04487	196 aa		4.88	□□□□□ -1.63
RAD3	YER171W	YMR105W-A	Q8TGS8	64 aa		4.88	□□□□□ -1.63
RAD3	YER171W	GCN1	P33892	2672 aa	Known RBP	4.87	□□□□□ -1.63
RAD3	YER171W	FMP49	A0A023PZB3	126 aa		4.87	□□□□□ -1.63
RAD3	YER171W	YMR316C-A	I2HB70	103 aa		4.87	□□□□□ -1.63
RAD3	YER171W	ERS1	P17261	260 aa		4.87	□□□□□ -1.63
RAD3	YER171W	SUR2	P38992	349 aa		4.87	□□□□□ -1.63
RAD3	YER171W	MIC27	P50945	234 aa		4.87	□□□□□ -1.63
RAD3	YER171W	YHP1	Q04116	353 aa		4.87	□□□□□ -1.63
RAD3	YER171W	NAT3	Q06504	195 aa		4.87	□□□□□ -1.63
RAD3	YER171W	LOA1	Q06508	300 aa		4.87	□□□□□ -1.63
RAD3	YER171W	YDL218W	Q07629	317 aa		4.87	□□□□□ -1.63
RAD3	YER171W	MED7	Q08278	222 aa		4.87	□□□□□ -1.63
RAD3	YER171W	ILV5	P06168	395 aa	Known RBP	4.86	□□□□□ -1.63
RAD3	YER171W	RPS22A	P0C0W1	130 aa	Known RBP	4.86	□□□□□ -1.63
RAD3	YER171W	YHL037C	P38733	133 aa		4.86	□□□□□ -1.63
RAD3	YER171W	DSK2	P48510	373 aa		4.86	□□□□□ -1.63
RAD3	YER171W	YGL260W	P53056	76 aa		4.86	□□□□□ -1.63
RAD3	YER171W	CYT2	Q00873	224 aa		4.86	□□□□□ -1.63
RAD3	YER171W	STD1	Q02794	444 aa		4.86	□□□□□ -1.63
RAD3	YER171W	GIM5	Q04493	163 aa		4.86	□□□□□ -1.63
RAD3	YER171W	TRP4	P07285	380 aa	Predicted RBP	4.86	□□□□□ -1.63
RAD3	YER171W	NOP1	P15646	327 aa	Known RBP	4.86	□□□□□ -1.63
RAD3	YER171W	APS2	Q00381	147 aa		4.86	□□□□□ -1.63
RAD3	YER171W	CUE4	Q04201	117 aa	Predicted RBP	4.86	□□□□□ -1.63
RAD3	YER171W	GTO3	Q04806	366 aa		4.86	□□□□□ -1.63
RAD3	YER171W	POS5	Q06892	414 aa		4.86	□□□□□ -1.63
RAD3	YER171W	ATP10	P18496	279 aa		4.85	□□□□□ -1.63
RAD3	YER171W	YGL010W	P25338	174 aa		4.85	□□□□□ -1.63
RAD3	YER171W	GPI2	P46961	280 aa		4.85	□□□□□ -1.63
RAD3	YER171W	YGR149W	P48236	432 aa		4.85	□□□□□ -1.63
RAD3	YER171W	RNA15	P25299	296 aa	Predicted RBP	4.85	□□□□□ -1.63
RAD3	YER171W	RPS2	P25443	254 aa	Known RBP	4.85	□□□□□ -1.63
RAD3	YER171W	PHD1	P36093	366 aa		4.85	□□□□□ -1.63
RAD3	YER171W	CTR2	P38865	189 aa		4.85	□□□□□ -1.63
RAD3	YER171W	IRC22	P40006	225 aa		4.85	□□□□□ -1.63
RAD3	YER171W	YIL163C	P40448	117 aa		4.85	□□□□□ -1.63
RAD3	YER171W	YJL118W	P47022	219 aa		4.85	□□□□□ -1.63
RAD3	YER171W	SED1	Q01589	338 aa		4.85	□□□□□ -1.63
RAD3	YER171W	YPL278C	Q08990	100 aa		4.85	□□□□□ -1.63
RAD3	YER171W	MET32	Q12041	191 aa		4.85	□□□□□ -1.63
RAD3	YER171W	YBL029C-A	Q3E756	94 aa		4.85	□□□□□ -1.63
RAD3	YER171W	TOM40	P23644	387 aa	Known RBP	4.84	□□□□□ -1.63
RAD3	YER171W	SPS18	P32572	300 aa		4.84	□□□□□ -1.63
RAD3	YER171W	DCN1	Q12395	269 aa		4.84	□□□□□ -1.63
RAD3	YER171W	LSM4	P40070	187 aa	Known RBP	4.84	□□□□□ -1.64
RAD3	YER171W	CYB5	P40312	120 aa		4.84	□□□□□ -1.64
RAD3	YER171W	GEP5	Q12393	293 aa		4.84	□□□□□ -1.64
RAD3	YER171W	HTB1	P02293	131 aa	Known RBP	4.83	□□□□□ -1.64
RAD3	YER171W	ECM14	P38836	430 aa		4.83	□□□□□ -1.64
RAD3	YER171W	CDC40	P40968	455 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD3	YER171W	SSU72	P53538	206 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD3	YER171W	SMT3	Q12306	101 aa	Known RBP	4.83	□□□□□ -1.64
RAD3	YER171W	PAA1	Q12447	191 aa	Known RBP	4.83	□□□□□ -1.64
RAD3	YER171W	PIS1	P06197	220 aa	Known RBP	4.83	□□□□□ -1.64
RAD3	YER171W	RAD23	P32628	398 aa	Known RBP	4.83	□□□□□ -1.64
RAD3	YER171W	SOR1	P35497	357 aa	Known RBP	4.83	□□□□□ -1.64
RAD3	YER171W	VHS2	P40463	436 aa		4.83	□□□□□ -1.64
RAD3	YER171W	ERV14	P53173	138 aa		4.83	□□□□□ -1.64
RAD3	YER171W	SOR2	Q07786	357 aa		4.83	□□□□□ -1.64
RAD3	YER171W	ERG27	Q12452	347 aa	Known RBP	4.83	□□□□□ -1.64
RAD3	YER171W	YNR034W-A	Q3E841	98 aa		4.83	□□□□□ -1.64
RAD3	YER171W	YIL134C-A	Q45U18	67 aa		4.83	□□□□□ -1.64
RAD3	YER171W	YAR068W	P39564	161 aa		4.82	□□□□□ -1.64
RAD3	YER171W	SAS2	P40963	338 aa		4.82	□□□□□ -1.64
RAD3	YER171W	RRG8	Q06109	277 aa		4.82	□□□□□ -1.64
RAD3	YER171W	POR1	P04840	283 aa	Known RBP	4.81	□□□□□ -1.64
RAD3	YER171W	SUA7	P29055	345 aa	Predicted RBP	4.81	□□□□□ -1.64
RAD3	YER171W	FPR2	P32472	135 aa		4.81	□□□□□ -1.64
RAD3	YER171W	YBR090C	P38253	122 aa		4.81	□□□□□ -1.64
RAD3	YER171W	SRP14	P38985	146 aa		4.81	□□□□□ -1.64
RAD3	YER171W	YER121W	P40076	114 aa		4.81	□□□□□ -1.64
RAD3	YER171W	OST3	P48439	350 aa		4.81	□□□□□ -1.64
RAD3	YER171W	SUR7	P54003	302 aa		4.81	□□□□□ -1.64
RAD3	YER171W	SRP21	P32342	167 aa		4.81	□□□□□ -1.64
RAD3	YER171W	YKL075C	P36083	450 aa		4.81	□□□□□ -1.64
RAD3	YER171W	YGP1	P38616	354 aa	Known RBP	4.81	□□□□□ -1.64
RAD3	YER171W	CPD1	P53314	239 aa		4.81	□□□□□ -1.64
RAD3	YER171W	OCA2	P53949	197 aa		4.81	□□□□□ -1.64
RAD3	YER171W	YNL046W	P53956	172 aa		4.81	□□□□□ -1.64
RAD3	YER171W	MCH1	Q07376	486 aa		4.81	□□□□□ -1.64
RAD3	YER171W	SNA4	Q07549	140 aa		4.81	□□□□□ -1.64
RAD3	YER171W	YOR105W	Q08504	108 aa		4.81	□□□□□ -1.64
RAD3	YER171W	SCM4	P32564	187 aa		4.8	□□□□□ -1.64
RAD3	YER171W	NNK1	P36003	928 aa		4.8	□□□□□ -1.64
RAD3	YER171W	MRPL11	P36521	249 aa	Predicted RBP	4.8	□□□□□ -1.64
RAD3	YER171W	YDL009C	Q12210	107 aa		4.8	□□□□□ -1.64
RAD3	YER171W	COA6	Q3E846	104 aa		4.8	□□□□□ -1.64
RAD3	YER171W	SOD1	P00445	154 aa	Known RBP	4.8	□□□□□ -1.64
RAD3	YER171W	HSP12	P22943	109 aa	Known RBP	4.8	□□□□□ -1.64
RAD3	YER171W	PMU1	P36069	295 aa		4.8	□□□□□ -1.64
RAD3	YER171W	PAM17	P36147	197 aa		4.8	□□□□□ -1.64
RAD3	YER171W	CSH1	P38287	376 aa		4.8	□□□□□ -1.64
RAD3	YER171W	HUA1	P40325	198 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms