RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeastyeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT2YER161C DDI3P0CH64 225 aa2.47□□□□□ -2.01
SPT2YER161C SCL1P21243 252 aaKnown RBP2.47□□□□□ -2.01
SPT2YER161C PCL1P24867 279 aa2.47□□□□□ -2.01
SPT2YER161C VMA11P32842 164 aa2.47□□□□□ -2.01
SPT2YER161C SRL3P36167 246 aa2.47□□□□□ -2.01
SPT2YER161C YHR125WP38831 101 aa2.47□□□□□ -2.01
SPT2YER161C YEA4P40004 342 aa2.47□□□□□ -2.01
SPT2YER161C PGD1P40356 397 aa2.47□□□□□ -2.01
SPT2YER161C RBL2P48606 106 aaKnown RBP2.47□□□□□ -2.01
SPT2YER161C SMD1Q02260 146 aaPredicted RBP2.47□□□□□ -2.01
SPT2YER161C YMR320WQ04897 101 aa2.47□□□□□ -2.01
SPT2YER161C YDR278CQ05612 105 aa2.47□□□□□ -2.01
SPT2YER161C MCP1Q12106 302 aa2.47□□□□□ -2.01
SPT2YER161C PSF1Q12488 208 aa2.47□□□□□ -2.01
SPT2YER161C YHR032W-AP0C5N6 59 aa2.46□□□□□ -2.02
SPT2YER161C RPL30P14120 105 aaKnown RBP2.46□□□□□ -2.02
SPT2YER161C CCA1P21269 546 aa2.46□□□□□ -2.02
SPT2YER161C HYM1P32464 399 aa2.46□□□□□ -2.02
SPT2YER161C ARC15P40518 154 aaRIP-Chip data2.46□□□□□ -2.02not detected
SPT2YER161C ECO1P43605 281 aa2.46□□□□□ -2.02
SPT2YER161C BUD13P46947 266 aaPredicted RBP2.46□□□□□ -2.02
SPT2YER161C OST2P46964 130 aa2.46□□□□□ -2.02
SPT2YER161C GON7P46984 123 aa2.46□□□□□ -2.02
SPT2YER161C YGL088WP53151 121 aa2.46□□□□□ -2.02
SPT2YER161C HAL1Q01766 294 aa2.46□□□□□ -2.02
SPT2YER161C YDR391CQ04170 232 aa2.46□□□□□ -2.02
SPT2YER161C SDH7Q04401 133 aa2.46□□□□□ -2.02
SPT2YER161C YOR214CQ12282 236 aa2.46□□□□□ -2.02
SPT2YER161C SGA1P08019 549 aa2.45□□□□□ -2.02
SPT2YER161C PHO13P19881 312 aa2.45□□□□□ -2.02
SPT2YER161C YEL045CP32616 141 aa2.45□□□□□ -2.02
SPT2YER161C YBR220CP38318 560 aa2.45□□□□□ -2.02
SPT2YER161C SER2P42941 309 aa2.45□□□□□ -2.02
SPT2YER161C YFL012WP43580 148 aa2.45□□□□□ -2.02
SPT2YER161C ERJ5P43613 295 aaPredicted RBP2.45□□□□□ -2.02
SPT2YER161C SKI6P46948 246 aaPredicted RBP2.45□□□□□ -2.02
SPT2YER161C YGR017WP53210 297 aa2.45□□□□□ -2.02
SPT2YER161C YDR274CP87283 123 aa2.45□□□□□ -2.02
SPT2YER161C RSM10Q03201 203 aa2.45□□□□□ -2.02
SPT2YER161C NHP10Q03435 203 aa2.45□□□□□ -2.02
SPT2YER161C TRM12Q04235 462 aa2.45□□□□□ -2.02
SPT2YER161C YMR253CQ04835 414 aa2.45□□□□□ -2.02
SPT2YER161C PRP11Q07350 266 aaPredicted RBP2.45□□□□□ -2.02
SPT2YER161C ZEO1Q08245 113 aa2.45□□□□□ -2.02
SPT2YER161C TMC1Q08422 150 aaPredicted RBP2.45□□□□□ -2.02
SPT2YER161C YDL180WQ12301 547 aa2.45□□□□□ -2.02
SPT2YER161C DGK1Q12382 290 aa2.45□□□□□ -2.02
SPT2YER161C TIM9O74700 87 aa2.44□□□□□ -2.02
SPT2YER161C RPL9AP05738 191 aaKnown RBP2.44□□□□□ -2.02
SPT2YER161C STP22P25604 385 aa2.44□□□□□ -2.02
SPT2YER161C UTH1P36135 365 aa2.44□□□□□ -2.02
SPT2YER161C MRPL24P36525 258 aaPredicted RBP2.44□□□□□ -2.02
SPT2YER161C YER188WP40103 239 aa2.44□□□□□ -2.02
SPT2YER161C PRE5P40302 234 aaKnown RBP2.44□□□□□ -2.02
SPT2YER161C TDA4P47153 279 aa2.44□□□□□ -2.02
SPT2YER161C DSK2P48510 373 aa2.44□□□□□ -2.02
SPT2YER161C RPL9BP51401 191 aaKnown RBP2.44□□□□□ -2.02
SPT2YER161C YGL193CP53097 103 aa2.44□□□□□ -2.02
SPT2YER161C APJ1P53940 528 aa2.44□□□□□ -2.02
SPT2YER161C FMN1Q03778 218 aa2.44□□□□□ -2.02
SPT2YER161C HRD1Q08109 551 aa2.44□□□□□ -2.02
SPT2YER161C REP2P03872 296 aa2.43□□□□□ -2.02
SPT2YER161C ATP15P21306 62 aa2.43□□□□□ -2.02
SPT2YER161C YKR032WP36127 104 aa2.43□□□□□ -2.02
SPT2YER161C TRS20P38334 175 aa2.43□□□□□ -2.02
SPT2YER161C RPS20P38701 121 aaKnown RBP2.43□□□□□ -2.02
SPT2YER161C NSG1P38837 291 aa2.43□□□□□ -2.02
SPT2YER161C VMA7P39111 118 aa2.43□□□□□ -2.02
SPT2YER161C YPL073CP40323 161 aa2.43□□□□□ -2.02
SPT2YER161C DLS1P40366 167 aa2.43□□□□□ -2.02
SPT2YER161C YFR054CP43622 192 aa2.43□□□□□ -2.02
SPT2YER161C TTI2P47168 421 aa2.43□□□□□ -2.02
SPT2YER161C SBH1P52870 82 aa2.43□□□□□ -2.02
SPT2YER161C TIM13P53299 105 aa2.43□□□□□ -2.02
SPT2YER161C YMR099CQ03161 297 aaKnown RBP2.43□□□□□ -2.02
SPT2YER161C FCF1Q05498 189 aaPredicted RBP2.43□□□□□ -2.02
SPT2YER161C FSF1Q12029 327 aaKnown RBP2.43□□□□□ -2.02
SPT2YER161C SAS5Q99314 248 aa2.43□□□□□ -2.02
SPT2YER161C HAP2P06774 265 aa2.42□□□□□ -2.02
SPT2YER161C TKL2P33315 681 aa2.42□□□□□ -2.02
SPT2YER161C PAN3P36102 679 aaPredicted RBP2.42□□□□□ -2.02
SPT2YER161C AIM18P38884 321 aa2.42□□□□□ -2.02
SPT2YER161C YFL019CP43576 117 aa2.42□□□□□ -2.02
SPT2YER161C YFR045WP43617 309 aa2.42□□□□□ -2.02
SPT2YER161C XPT1P47165 209 aa2.42□□□□□ -2.02
SPT2YER161C AIF1P52923 378 aa2.42□□□□□ -2.02
SPT2YER161C HHO1P53551 258 aa2.42□□□□□ -2.02
SPT2YER161C YLR099W-AQ3E798 87 aa2.42□□□□□ -2.02
SPT2YER161C YGL041W-AP0C5N3 154 aa2.41□□□□□ -2.02
SPT2YER161C HSP26P15992 214 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SPT2YER161C MRP49P32388 137 aa2.41□□□□□ -2.02
SPT2YER161C PTC1P35182 281 aa2.41□□□□□ -2.02
SPT2YER161C YER134CP40081 178 aa2.41□□□□□ -2.02
SPT2YER161C GLR1P41921 483 aaKnown RBP2.41□□□□□ -2.02
SPT2YER161C YGR026WP53217 278 aa2.41□□□□□ -2.02
SPT2YER161C CAB4P53332 305 aa2.41□□□□□ -2.02
SPT2YER161C APS2Q00381 147 aa2.41□□□□□ -2.02
SPT2YER161C TMA23Q03525 211 aa2.41□□□□□ -2.02
SPT2YER161C AIM36Q03798 255 aa2.41□□□□□ -2.02
SPT2YER161C SPG3Q04398 127 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms