RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE3, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE3YDR288W YDR391CQ04170 232 aa1.8□□□□□ -2.12
NSE3YDR288W SYM1Q06563 197 aa1.8□□□□□ -2.12
NSE3YDR288W FAS1P07149 2051 aaKnown RBP1.79□□□□□ -2.12
NSE3YDR288W MRPL15P36523 253 aa1.79□□□□□ -2.12
NSE3YDR288W ETR1P38071 380 aa1.79□□□□□ -2.12
NSE3YDR288W YEL028WP39989 153 aa1.79□□□□□ -2.12
NSE3YDR288W MAK3Q03503 176 aa1.79□□□□□ -2.12
NSE3YDR288W YML079WQ03629 201 aa1.79□□□□□ -2.12
NSE3YDR288W TAR1Q8TGM6 124 aa1.79□□□□□ -2.12
NSE3YDR288W UBC6P33296 250 aaPredicted RBP1.78□□□□□ -2.12
NSE3YDR288W PTC1P35182 281 aa1.78□□□□□ -2.12
NSE3YDR288W YBR242WP38331 238 aa1.78□□□□□ -2.12
NSE3YDR288W YER121WP40076 114 aa1.78□□□□□ -2.12
NSE3YDR288W YDR476CQ03362 224 aa1.78□□□□□ -2.12
NSE3YDR288W YDL157CQ12082 118 aa1.78□□□□□ -2.12
NSE3YDR288W UBC8P28263 218 aa1.77□□□□□ -2.13
NSE3YDR288W YGL101WP53144 215 aa1.77□□□□□ -2.13
NSE3YDR288W TLG1Q03322 224 aa1.77□□□□□ -2.13
NSE3YDR288W LIP1Q03579 150 aa1.77□□□□□ -2.13
NSE3YDR288W ACC1Q00955 2233 aaKnown RBP1.76□□□□□ -2.13
NSE3YDR288W QCR2P07257 368 aa1.76□□□□□ -2.13
NSE3YDR288W PAC10P48363 199 aa1.76□□□□□ -2.13
NSE3YDR288W NQM1P53228 333 aaPredicted RBP1.76□□□□□ -2.13
NSE3YDR288W UIP4Q08926 304 aa1.76□□□□□ -2.13
NSE3YDR288W YLR053CQ12026 108 aa1.76□□□□□ -2.13
NSE3YDR288W FIT1Q04433 528 aa1.75□□□□□ -2.13
NSE3YDR288W YLR046CQ12253 270 aa1.75□□□□□ -2.13
NSE3YDR288W YGR269WP40326 108 aa1.74□□□□□ -2.13
NSE3YDR288W YFL051CP43552 160 aa1.74□□□□□ -2.13
NSE3YDR288W RDI1Q12434 202 aa1.74□□□□□ -2.13
NSE3YDR288W YPR203WQ08994 102 aa1.73□□□□□ -2.13
NSE3YDR288W YLR422WQ06409 1932 aa1.72□□□□□ -2.13
NSE3YDR288W PRE1P22141 198 aaKnown RBP1.72□□□□□ -2.13
NSE3YDR288W SRP102P36057 244 aaPredicted RBP1.72□□□□□ -2.13
NSE3YDR288W YHL037CP38733 133 aa1.72□□□□□ -2.13
NSE3YDR288W RPS28BP0C0X0 67 aaKnown RBP1.71□□□□□ -2.14
NSE3YDR288W FES1P38260 290 aa1.71□□□□□ -2.14
NSE3YDR288W RPS28AQ3E7X9 67 aaPredicted RBP1.71□□□□□ -2.14
NSE3YDR288W SPS2P08459 502 aa1.7□□□□□ -2.14
NSE3YDR288W ATP5P09457 212 aa1.7□□□□□ -2.14
NSE3YDR288W AVO2Q04749 426 aa1.7□□□□□ -2.14
NSE3YDR288W RPS25BP0C0T4 108 aaKnown RBP1.69□□□□□ -2.14
NSE3YDR288W AME1P38313 324 aa1.69□□□□□ -2.14
NSE3YDR288W GEP7P53171 287 aa1.69□□□□□ -2.14
NSE3YDR288W LSM3P57743 89 aaKnown RBP1.69□□□□□ -2.14
NSE3YDR288W ATG10Q07879 167 aa1.69□□□□□ -2.14
NSE3YDR288W RPS25AQ3E792 108 aaPredicted RBP1.69□□□□□ -2.14
NSE3YDR288W UBI4P0CG63 381 aaKnown RBP1.68□□□□□ -2.14
NSE3YDR288W HTD2P38790 280 aaKnown RBP1.68□□□□□ -2.14
NSE3YDR288W RPL37BP51402 88 aaKnown RBP1.68□□□□□ -2.14
NSE3YDR288W RME1P32338 300 aaKnown RBP1.67□□□□□ -2.14
NSE3YDR288W CCC1P47818 322 aa1.67□□□□□ -2.14
NSE3YDR288W YGL193CP53097 103 aa1.67□□□□□ -2.14
NSE3YDR288W ORM1P53224 222 aa1.67□□□□□ -2.14
NSE3YDR288W YNR064CP53750 290 aa1.67□□□□□ -2.14
NSE3YDR288W SHB17P36136 271 aaKnown RBP1.66□□□□□ -2.14
NSE3YDR288W YPT31P38555 223 aaKnown RBP1.66□□□□□ -2.14
NSE3YDR288W DCV1P43595 202 aa1.66□□□□□ -2.14
NSE3YDR288W PBI2P0CT04 75 aaKnown RBP1.65□□□□□ -2.15
NSE3YDR288W RPL30P14120 105 aaKnown RBP1.65□□□□□ -2.15
NSE3YDR288W PEX34P25584 144 aa1.65□□□□□ -2.15
NSE3YDR288W BUB2P26448 306 aaPredicted RBP1.65□□□□□ -2.15
NSE3YDR288W YAR064WP39563 99 aa1.65□□□□□ -2.15
NSE3YDR288W DLS1P40366 167 aa1.65□□□□□ -2.15
NSE3YDR288W CIN5P40917 295 aa1.65□□□□□ -2.15
NSE3YDR288W YPR114WQ06107 315 aa1.65□□□□□ -2.15
NSE3YDR288W YPR202WQ08993 238 aa1.65□□□□□ -2.15
NSE3YDR288W DUR1,2P32528 1835 aaKnown RBP1.64□□□□□ -2.15
NSE3YDR288W ADE6P38972 1358 aaKnown RBP1.64□□□□□ -2.15
NSE3YDR288W INO4P13902 151 aa1.64□□□□□ -2.15
NSE3YDR288W YKR070WP36151 352 aaKnown RBP1.64□□□□□ -2.15
NSE3YDR288W YIL102CP40488 101 aa1.64□□□□□ -2.15
NSE3YDR288W YDL241WQ07738 123 aa1.64□□□□□ -2.15
NSE3YDR288W SPA2P23201 1466 aaKnown RBP1.63□□□□□ -2.15
NSE3YDR288W DER1P38307 211 aa1.63□□□□□ -2.15
NSE3YDR288W APQ12P40532 138 aa1.63□□□□□ -2.15
NSE3YDR288W YGL230CP53074 147 aa1.63□□□□□ -2.15
NSE3YDR288W YDR102CQ03864 110 aa1.63□□□□□ -2.15
NSE3YDR288W LCL2Q08045 131 aa1.63□□□□□ -2.15
NSE3YDR288W FCY1Q12178 158 aa1.63□□□□□ -2.15
NSE3YDR288W SLM6P38343 150 aa1.62□□□□□ -2.15
NSE3YDR288W YJR015WP47090 510 aa1.62□□□□□ -2.15
NSE3YDR288W TAF2P23255 1407 aa1.62□□□□□ -2.15
NSE3YDR288W NSL1Q12143 216 aa1.61□□□□□ -2.15
NSE3YDR288W KIN28P06242 306 aa1.6□□□□□ -2.15
NSE3YDR288W SPT14P32363 452 aa1.6□□□□□ -2.15
NSE3YDR288W YEL014CP39999 101 aa1.6□□□□□ -2.15
NSE3YDR288W YDC1Q02896 317 aa1.6□□□□□ -2.15
NSE3YDR288W YPD1Q07688 167 aa1.6□□□□□ -2.15
NSE3YDR288W VAM10Q08474 114 aa1.6□□□□□ -2.15
NSE3YDR288W FIP1P45976 327 aa1.59□□□□□ -2.15
NSE3YDR288W APS3P47064 194 aa1.59□□□□□ -2.15
NSE3YDR288W AIM36Q03798 255 aa1.59□□□□□ -2.15
NSE3YDR288W KEI1Q06346 221 aa1.59□□□□□ -2.15
NSE3YDR288W CCW12Q12127 133 aa1.59□□□□□ -2.15
NSE3YDR288W YGL041W-AP0C5N3 154 aa1.58□□□□□ -2.16
NSE3YDR288W EFG1Q3E705 233 aaKnown RBP1.58□□□□□ -2.16
NSE3YDR288W YER188C-AP0C0V2 99 aa1.57□□□□□ -2.16
NSE3YDR288W FIG1P38224 298 aa1.57□□□□□ -2.16
NSE3YDR288W FMN1Q03778 218 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms