RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C RAD10P06838 210 aa3.45□□□□□ -1.86
SPR28YDR218C ADK1P07170 222 aaKnown RBP3.45□□□□□ -1.86
SPR28YDR218C YKR070WP36151 352 aaKnown RBP3.45□□□□□ -1.86
SPR28YDR218C RFS1P38234 210 aaKnown RBP3.45□□□□□ -1.86
SPR28YDR218C YBR242WP38331 238 aa3.45□□□□□ -1.86
SPR28YDR218C RPB11P38902 120 aa3.45□□□□□ -1.86
SPR28YDR218C YEL028WP39989 153 aa3.45□□□□□ -1.86
SPR28YDR218C PHS1P40857 217 aa3.45□□□□□ -1.86
SPR28YDR218C RNH202Q05635 350 aa3.45□□□□□ -1.86
SPR28YDR218C SAS5Q99314 248 aa3.45□□□□□ -1.86
SPR28YDR218C TY1B-HO13535 1793 aa3.45□□□□□ -1.86
SPR28YDR218C AUS1Q08409 1394 aa3.44□□□□□ -1.86
SPR28YDR218C VAR1P02381 398 aa3.44□□□□□ -1.86
SPR28YDR218C POR1P04840 283 aaKnown RBP3.44□□□□□ -1.86
SPR28YDR218C HIS3P06633 220 aa3.44□□□□□ -1.86
SPR28YDR218C YRA2P36036 203 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SPR28YDR218C MRPL15P36523 253 aa3.44□□□□□ -1.86
SPR28YDR218C MRPL27P36526 146 aaPredicted RBP3.44□□□□□ -1.86
SPR28YDR218C MPC1P53157 130 aaKnown RBP3.44□□□□□ -1.86
SPR28YDR218C MRPS16Q02608 121 aa3.44□□□□□ -1.86
SPR28YDR218C RSM10Q03201 203 aa3.44□□□□□ -1.86
SPR28YDR218C DML1Q03652 475 aa3.44□□□□□ -1.86
SPR28YDR218C SHH3Q04487 196 aa3.44□□□□□ -1.86
SPR28YDR218C MSW1P04803 379 aa3.43□□□□□ -1.86
SPR28YDR218C RPS19AP07280 144 aaKnown RBP3.43□□□□□ -1.86
SPR28YDR218C RPS19BP07281 144 aaPredicted RBP3.43□□□□□ -1.86
SPR28YDR218C YBR090CP38253 122 aa3.43□□□□□ -1.86
SPR28YDR218C CTR2P38865 189 aa3.43□□□□□ -1.86
SPR28YDR218C SPC25P40014 221 aa3.43□□□□□ -1.86
SPR28YDR218C YNR064CP53750 290 aa3.43□□□□□ -1.86
SPR28YDR218C SMD1Q02260 146 aaPredicted RBP3.43□□□□□ -1.86
SPR28YDR218C LIP1Q03579 150 aa3.43□□□□□ -1.86
SPR28YDR218C FYV12Q08559 129 aa3.43□□□□□ -1.86
SPR28YDR218C UIP4Q08926 304 aa3.43□□□□□ -1.86
SPR28YDR218C YHR032W-AP0C5N6 59 aa3.42□□□□□ -1.86
SPR28YDR218C SEC59P20048 519 aa3.42□□□□□ -1.86
SPR28YDR218C YKR032WP36127 104 aa3.42□□□□□ -1.86
SPR28YDR218C TRS20P38334 175 aa3.42□□□□□ -1.86
SPR28YDR218C AIM18P38884 321 aa3.42□□□□□ -1.86
SPR28YDR218C GON7P46984 123 aa3.42□□□□□ -1.86
SPR28YDR218C EAF6P47128 113 aa3.42□□□□□ -1.86
SPR28YDR218C ATP19P81451 68 aa3.42□□□□□ -1.86
SPR28YDR218C UPS1Q05776 175 aa3.42□□□□□ -1.86
SPR28YDR218C ANT1Q06497 328 aa3.42□□□□□ -1.86
SPR28YDR218C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SPR28YDR218C TRM732Q03496 1420 aa3.42□□□□□ -1.86
SPR28YDR218C RAS2P01120 322 aaKnown RBP3.41□□□□□ -1.86
SPR28YDR218C MRS4P23500 304 aa3.41□□□□□ -1.86
SPR28YDR218C GAT4P40569 121 aa3.41□□□□□ -1.86
SPR28YDR218C SAY1P53324 424 aa3.41□□□□□ -1.86
SPR28YDR218C YDR102CQ03864 110 aa3.41□□□□□ -1.86
SPR28YDR218C ATP20Q12233 115 aa3.41□□□□□ -1.86
SPR28YDR218C OCA6Q12454 224 aa3.41□□□□□ -1.86
SPR28YDR218C HYP2P23301 157 aaKnown RBP3.4□□□□□ -1.87
SPR28YDR218C YEA6P39953 335 aa3.4□□□□□ -1.87
SPR28YDR218C GNA1P43577 159 aaPredicted RBP3.4□□□□□ -1.87
SPR28YDR218C YGR164WP53291 111 aa3.4□□□□□ -1.87
SPR28YDR218C YNR062CP53748 327 aa3.4□□□□□ -1.87
SPR28YDR218C TVP18Q04767 167 aa3.4□□□□□ -1.87
SPR28YDR218C FCF1Q05498 189 aaPredicted RBP3.4□□□□□ -1.87
SPR28YDR218C YLR042CQ07990 161 aa3.4□□□□□ -1.87
SPR28YDR218C REV3P14284 1504 aa3.39□□□□□ -1.87
SPR28YDR218C DDR48P18899 430 aaKnown RBP3.39□□□□□ -1.87
SPR28YDR218C SDH4P37298 181 aa3.39□□□□□ -1.87
SPR28YDR218C RRT1P38192 103 aa3.39□□□□□ -1.87
SPR28YDR218C TVP23P38962 199 aa3.39□□□□□ -1.87
SPR28YDR218C YEL073CP39974 107 aa3.39□□□□□ -1.87
SPR28YDR218C LSM8P47093 109 aaKnown RBP3.39□□□□□ -1.87
SPR28YDR218C YOR097CQ12274 175 aaPredicted RBP3.39□□□□□ -1.87
SPR28YDR218C YOL085CQ99345 113 aa3.39□□□□□ -1.87
SPR28YDR218C YET1P35723 206 aa3.38□□□□□ -1.87
SPR28YDR218C PAM17P36147 197 aa3.38□□□□□ -1.87
SPR28YDR218C MPM1P40364 252 aa3.38□□□□□ -1.87
SPR28YDR218C ATO3Q12359 275 aa3.38□□□□□ -1.87
SPR28YDR218C DDP1Q99321 188 aaKnown RBP3.38□□□□□ -1.87
SPR28YDR218C KRE5P22023 1365 aa3.38□□□□□ -1.87
SPR28YDR218C UBC5P15732 148 aa3.37□□□□□ -1.87
SPR28YDR218C MDH2P22133 377 aa3.37□□□□□ -1.87
SPR28YDR218C GAA1P39012 614 aa3.37□□□□□ -1.87
SPR28YDR218C YNL217WP40152 326 aa3.37□□□□□ -1.87
SPR28YDR218C YIR035CP40579 254 aa3.37□□□□□ -1.87
SPR28YDR218C YFL012WP43580 148 aa3.37□□□□□ -1.87
SPR28YDR218C YFR045WP43617 309 aa3.37□□□□□ -1.87
SPR28YDR218C DAD3P69850 94 aa3.37□□□□□ -1.87
SPR28YDR218C HAL1Q01766 294 aa3.37□□□□□ -1.87
SPR28YDR218C RCE1Q03530 315 aa3.37□□□□□ -1.87
SPR28YDR218C TMA19P35691 167 aaKnown RBP3.36□□□□□ -1.87
SPR28YDR218C KRE9P39005 276 aa3.36□□□□□ -1.87
SPR28YDR218C FLX1P40464 311 aa3.36□□□□□ -1.87
SPR28YDR218C THG1P53215 237 aaKnown RBP3.36□□□□□ -1.87
SPR28YDR218C RIM9Q04734 239 aa3.36□□□□□ -1.87
SPR28YDR218C ATG10Q07879 167 aa3.36□□□□□ -1.87
SPR28YDR218C YPR063CQ12160 140 aa3.36□□□□□ -1.87
SPR28YDR218C PDR11P40550 1411 aa3.36□□□□□ -1.87
SPR28YDR218C GEA2P39993 1459 aaKnown RBP3.35□□□□□ -1.87
SPR28YDR218C YCR050CP25630 102 aa3.35□□□□□ -1.87
SPR28YDR218C YCR099CP25657 155 aa3.35□□□□□ -1.87
SPR28YDR218C FZF1P32805 299 aa3.35□□□□□ -1.87
SPR28YDR218C CLB6P32943 380 aa3.35□□□□□ -1.87
SPR28YDR218C KEI1Q06346 221 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms