RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YAE1P47118 141 aaPredicted RBP2.18□□□□□ -2.06
SHU2YDR078C MOG1P47123 218 aa2.18□□□□□ -2.06
SHU2YDR078C PAC10P48363 199 aa2.18□□□□□ -2.06
SHU2YDR078C HHT1P61830 136 aa2.18□□□□□ -2.06
SHU2YDR078C ATG41Q12048 136 aa2.18□□□□□ -2.06
SHU2YDR078C RPB7P34087 171 aa2.17□□□□□ -2.06
SHU2YDR078C SRP102P36057 244 aaPredicted RBP2.17□□□□□ -2.06
SHU2YDR078C MPM1P40364 252 aa2.17□□□□□ -2.06
SHU2YDR078C HYR1P40581 163 aaKnown RBP2.17□□□□□ -2.06
SHU2YDR078C FIP1P45976 327 aa2.17□□□□□ -2.06
SHU2YDR078C RCE1Q03530 315 aa2.17□□□□□ -2.06
SHU2YDR078C UPS3Q04006 179 aa2.17□□□□□ -2.06
SHU2YDR078C PET54P10834 293 aa2.16□□□□□ -2.06
SHU2YDR078C STF2P16965 84 aa2.16□□□□□ -2.06
SHU2YDR078C MAK31P23059 88 aa2.16□□□□□ -2.06
SHU2YDR078C CWC27Q02770 301 aa2.16□□□□□ -2.06
SHU2YDR078C YDC1Q02896 317 aa2.16□□□□□ -2.06
SHU2YDR078C LIP1Q03579 150 aa2.16□□□□□ -2.06
SHU2YDR078C YNL146C-AQ3E7Z1 64 aa2.16□□□□□ -2.06
SHU2YDR078C FPR1P20081 114 aaKnown RBP2.15□□□□□ -2.07
SHU2YDR078C HTD2P38790 280 aaKnown RBP2.15□□□□□ -2.07
SHU2YDR078C LSM1P47017 172 aaKnown RBP2.15□□□□□ -2.07
SHU2YDR078C YDR102CQ03864 110 aa2.15□□□□□ -2.07
SHU2YDR078C PKR1Q03880 122 aaKnown RBP2.15□□□□□ -2.07
SHU2YDR078C YPD1Q07688 167 aa2.15□□□□□ -2.07
SHU2YDR078C YER181CP40097 107 aa2.14□□□□□ -2.07
SHU2YDR078C CCS1P40202 249 aaKnown RBP2.14□□□□□ -2.07
SHU2YDR078C MOB1P40484 314 aa2.14□□□□□ -2.07
SHU2YDR078C CCC1P47818 322 aa2.14□□□□□ -2.07
SHU2YDR078C MZM1Q03429 123 aaPredicted RBP2.14□□□□□ -2.07
SHU2YDR078C YMR252CQ04814 134 aa2.14□□□□□ -2.07
SHU2YDR078C YBL010CP32788 280 aa2.13□□□□□ -2.07
SHU2YDR078C YHL042WP38729 150 aa2.13□□□□□ -2.07
SHU2YDR078C IPI1P38803 334 aaPredicted RBP2.13□□□□□ -2.07
SHU2YDR078C YNR064CP53750 290 aa2.13□□□□□ -2.07
SHU2YDR078C YML079WQ03629 201 aa2.13□□□□□ -2.07
SHU2YDR078C YDR391CQ04170 232 aa2.13□□□□□ -2.07
SHU2YDR078C ATG10Q07879 167 aa2.13□□□□□ -2.07
SHU2YDR078C HRD1Q08109 551 aa2.13□□□□□ -2.07
SHU2YDR078C YMR030W-AQ3E760 96 aa2.13□□□□□ -2.07
SHU2YDR078C YGL193CP53097 103 aa2.12□□□□□ -2.07
SHU2YDR078C RAV2Q03956 351 aa2.12□□□□□ -2.07
SHU2YDR078C ELP6Q04868 273 aa2.12□□□□□ -2.07
SHU2YDR078C YPR114WQ06107 315 aa2.12□□□□□ -2.07
SHU2YDR078C YPT31P38555 223 aaKnown RBP2.11□□□□□ -2.07
SHU2YDR078C UBC7Q02159 165 aa2.11□□□□□ -2.07
SHU2YDR078C YOR1P53049 1477 aa2.1□□□□□ -2.07
SHU2YDR078C SPS2P08459 502 aa2.1□□□□□ -2.07
SHU2YDR078C INO4P13902 151 aa2.1□□□□□ -2.07
SHU2YDR078C YEL067CP39978 195 aa2.1□□□□□ -2.07
SHU2YDR078C UIP4Q08926 304 aa2.1□□□□□ -2.07
SHU2YDR078C SEN2P16658 377 aa2.09□□□□□ -2.07
SHU2YDR078C PHO13P19881 312 aa2.09□□□□□ -2.07
SHU2YDR078C ETR1P38071 380 aa2.09□□□□□ -2.07
SHU2YDR078C YEL008WP40001 126 aa2.09□□□□□ -2.07
SHU2YDR078C SOK1P40317 901 aa2.09□□□□□ -2.07
SHU2YDR078C YGR269WP40326 108 aa2.09□□□□□ -2.07
SHU2YDR078C YJR015WP47090 510 aa2.09□□□□□ -2.07
SHU2YDR078C MRPL24P36525 258 aaPredicted RBP2.08□□□□□ -2.08
SHU2YDR078C YAP3P38749 330 aa2.08□□□□□ -2.08
SHU2YDR078C YJL218WP40892 196 aaKnown RBP2.08□□□□□ -2.08
SHU2YDR078C YFL065CP43539 102 aa2.08□□□□□ -2.08
SHU2YDR078C YDL241WQ07738 123 aa2.07□□□□□ -2.08
SHU2YDR078C MRS4P23500 304 aa2.06□□□□□ -2.08
SHU2YDR078C SPT14P32363 452 aa2.06□□□□□ -2.08
SHU2YDR078C RBL2P48606 106 aaKnown RBP2.06□□□□□ -2.08
SHU2YDR078C YMR320WQ04897 101 aa2.06□□□□□ -2.08
SHU2YDR078C YDL157CQ12082 118 aa2.06□□□□□ -2.08
SHU2YDR078C COA3Q3E7B2 85 aa2.06□□□□□ -2.08
SHU2YDR078C TAR1Q8TGM6 124 aa2.06□□□□□ -2.08
SHU2YDR078C FAS1P07149 2051 aaKnown RBP2.06□□□□□ -2.08
SHU2YDR078C YCL042WP25572 119 aa2.05□□□□□ -2.08
SHU2YDR078C RPS25BP0C0T4 108 aaKnown RBP2.04□□□□□ -2.08
SHU2YDR078C DDR48P18899 430 aaKnown RBP2.04□□□□□ -2.08
SHU2YDR078C SPA2P23201 1466 aaKnown RBP2.04□□□□□ -2.08
SHU2YDR078C ADE6P38972 1358 aaKnown RBP2.04□□□□□ -2.08
SHU2YDR078C CIN5P40917 295 aa2.04□□□□□ -2.08
SHU2YDR078C MET31Q03081 177 aa2.04□□□□□ -2.08
SHU2YDR078C RPS25AQ3E792 108 aaPredicted RBP2.04□□□□□ -2.08
SHU2YDR078C RFU1Q08003 200 aa2.03□□□□□ -2.08
SHU2YDR078C YLR422WQ06409 1932 aa2.02□□□□□ -2.09
SHU2YDR078C AQY2P0CD90 149 aa2.02□□□□□ -2.09
SHU2YDR078C HSP12P22943 109 aaKnown RBP2.02□□□□□ -2.09
SHU2YDR078C AHT1P29589 182 aa2.02□□□□□ -2.09
SHU2YDR078C SRP21P32342 167 aa2.02□□□□□ -2.09
SHU2YDR078C YGR201CP42936 225 aa2.02□□□□□ -2.09
SHU2YDR078C GEP7P53171 287 aa2.02□□□□□ -2.09
SHU2YDR078C YDR366CP87287 132 aa2.02□□□□□ -2.09
SHU2YDR078C RRT7Q07829 113 aa2.02□□□□□ -2.09
SHU2YDR078C BEM2P39960 2167 aaKnown RBP2.01□□□□□ -2.09
SHU2YDR078C ACP1P32463 125 aa2.01□□□□□ -2.09
SHU2YDR078C EST3Q03096 181 aa2.01□□□□□ -2.09
SHU2YDR078C FMN1Q03778 218 aa2.01□□□□□ -2.09
SHU2YDR078C YBR242WP38331 238 aa2□□□□□ -2.09
SHU2YDR078C GPI2P46961 280 aa2□□□□□ -2.09
SHU2YDR078C RCF2P53721 224 aa2□□□□□ -2.09
SHU2YDR078C COF1Q03048 143 aaKnown RBP2□□□□□ -2.09
SHU2YDR078C AVO2Q04749 426 aa2□□□□□ -2.09
SHU2YDR078C NMA1Q06178 401 aaKnown RBP2□□□□□ -2.09
SHU2YDR078C DUR1,2P32528 1835 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms