RNA–Protein interactions for RNA: YDR066C

RTR2, Transcript of Protein of unknown function, yeast

Gene RTR2, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTR2	YDR066C	HSK3	P69852	69 aa		0.83	□□□□□ -2.28
RTR2	YDR066C	GIM5	Q04493	163 aa		0.83	□□□□□ -2.28
RTR2	YDR066C	CHD1	P32657	1468 aa		0.83	□□□□□ -2.28
RTR2	YDR066C	CMD1	P06787	147 aa	Known RBP	0.82	□□□□□ -2.28
RTR2	YDR066C	YER188C-A	P0C0V2	99 aa		0.82	□□□□□ -2.28
RTR2	YDR066C	VPS51	P36116	164 aa		0.82	□□□□□ -2.28
RTR2	YDR066C	YHL037C	P38733	133 aa		0.82	□□□□□ -2.28
RTR2	YDR066C	YGL230C	P53074	147 aa		0.82	□□□□□ -2.28
RTR2	YDR066C	YML079W	Q03629	201 aa		0.82	□□□□□ -2.28
RTR2	YDR066C	FIT1	Q04433	528 aa		0.82	□□□□□ -2.28
RTR2	YDR066C	SYM1	Q06563	197 aa		0.82	□□□□□ -2.28
RTR2	YDR066C	CSH1	P38287	376 aa		0.81	□□□□□ -2.28
RTR2	YDR066C	MOB1	P40484	314 aa		0.81	□□□□□ -2.28
RTR2	YDR066C	HHT1	P61830	136 aa		0.81	□□□□□ -2.28
RTR2	YDR066C	THI74	Q04083	370 aa		0.81	□□□□□ -2.28
RTR2	YDR066C	SAC3	P46674	1301 aa		0.81	□□□□□ -2.28
RTR2	YDR066C	TRM3	Q07527	1436 aa		0.81	□□□□□ -2.28
RTR2	YDR066C	SPS2	P08459	502 aa		0.8	□□□□□ -2.28
RTR2	YDR066C	INO4	P13902	151 aa		0.8	□□□□□ -2.28
RTR2	YDR066C	SHB17	P36136	271 aa	Known RBP	0.8	□□□□□ -2.28
RTR2	YDR066C	YEL028W	P39989	153 aa		0.8	□□□□□ -2.28
RTR2	YDR066C	YGR269W	P40326	108 aa		0.8	□□□□□ -2.28
RTR2	YDR066C	DCV1	P43595	202 aa		0.8	□□□□□ -2.28
RTR2	YDR066C	AIM36	Q03798	255 aa		0.8	□□□□□ -2.28
RTR2	YDR066C	DUR1,2	P32528	1835 aa	Known RBP	0.8	□□□□□ -2.28
RTR2	YDR066C	HFA1	P32874	2273 aa		0.79	□□□□□ -2.28
RTR2	YDR066C	UGX2	P32772	223 aa		0.79	□□□□□ -2.28
RTR2	YDR066C	YKR070W	P36151	352 aa	Known RBP	0.79	□□□□□ -2.28
RTR2	YDR066C	GLC8	P41818	229 aa		0.79	□□□□□ -2.28
RTR2	YDR066C	YFL051C	P43552	160 aa		0.79	□□□□□ -2.28
RTR2	YDR066C	RPL37B	P51402	88 aa	Known RBP	0.79	□□□□□ -2.28
RTR2	YDR066C	TMA20	P89886	181 aa	Predicted RBP	0.79	□□□□□ -2.28
RTR2	YDR066C	LIP1	Q03579	150 aa		0.79	□□□□□ -2.28
RTR2	YDR066C	ATG10	Q07879	167 aa		0.79	□□□□□ -2.28
RTR2	YDR066C	CCW12	Q12127	133 aa		0.79	□□□□□ -2.28
RTR2	YDR066C	RPS25B	P0C0T4	108 aa	Known RBP	0.78	□□□□□ -2.28
RTR2	YDR066C	SRP102	P36057	244 aa	Predicted RBP	0.78	□□□□□ -2.28
RTR2	YDR066C	FES1	P38260	290 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	YPT31	P38555	223 aa	Known RBP	0.78	□□□□□ -2.28
RTR2	YDR066C	YER121W	P40076	114 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	YGL101W	P53144	215 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	YDR102C	Q03864	110 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	YPR114W	Q06107	315 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	YLR053C	Q12026	108 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	YDL157C	Q12082	118 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	RDI1	Q12434	202 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	RPS25A	Q3E792	108 aa	Predicted RBP	0.78	□□□□□ -2.28
RTR2	YDR066C	CMC2	Q3E7A4	109 aa		0.78	□□□□□ -2.28
RTR2	YDR066C	PRE1	P22141	198 aa	Known RBP	0.77	□□□□□ -2.29
RTR2	YDR066C	YJR015W	P47090	510 aa		0.77	□□□□□ -2.29
RTR2	YDR066C	AVO2	Q04749	426 aa		0.77	□□□□□ -2.29
RTR2	YDR066C	KEI1	Q06346	221 aa		0.77	□□□□□ -2.29
RTR2	YDR066C	HRD1	Q08109	551 aa		0.77	□□□□□ -2.29
RTR2	YDR066C	KIN28	P06242	306 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	ATP5	P09457	212 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	UBI4	P0CG63	381 aa	Known RBP	0.76	□□□□□ -2.29
RTR2	YDR066C	UBC6	P33296	250 aa	Predicted RBP	0.76	□□□□□ -2.29
RTR2	YDR066C	PTC1	P35182	281 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	YAR064W	P39563	99 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	YIL102C	P40488	101 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	ORM1	P53224	222 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	YNR064C	P53750	290 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	YDC1	Q02896	317 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	YDL241W	Q07738	123 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	UIP4	Q08926	304 aa		0.76	□□□□□ -2.29
RTR2	YDR066C	PRP8	P33334	2413 aa	Known RBP	0.75	□□□□□ -2.29
RTR2	YDR066C	SPT14	P32363	452 aa		0.75	□□□□□ -2.29
RTR2	YDR066C	DLS1	P40366	167 aa		0.75	□□□□□ -2.29
RTR2	YDR066C	APS3	P47064	194 aa		0.75	□□□□□ -2.29
RTR2	YDR066C	CCC1	P47818	322 aa		0.75	□□□□□ -2.29
RTR2	YDR066C	LSM3	P57743	89 aa	Known RBP	0.75	□□□□□ -2.29
RTR2	YDR066C	HTD2	P38790	280 aa	Known RBP	0.74	□□□□□ -2.29
RTR2	YDR066C	CIN5	P40917	295 aa		0.74	□□□□□ -2.29
RTR2	YDR066C	GEP7	P53171	287 aa		0.74	□□□□□ -2.29
RTR2	YDR066C	MAK3	Q03503	176 aa		0.74	□□□□□ -2.29
RTR2	YDR066C	NSL1	Q12143	216 aa		0.74	□□□□□ -2.29
RTR2	YDR066C	RIF1	P29539	1916 aa		0.74	□□□□□ -2.29
RTR2	YDR066C	RPL30	P14120	105 aa	Known RBP	0.73	□□□□□ -2.29
RTR2	YDR066C	TMA23	Q03525	211 aa		0.73	□□□□□ -2.29
RTR2	YDR066C	YPD1	Q07688	167 aa		0.73	□□□□□ -2.29
RTR2	YDR066C	FCY1	Q12178	158 aa		0.73	□□□□□ -2.29
RTR2	YDR066C	YLR046C	Q12253	270 aa		0.73	□□□□□ -2.29
RTR2	YDR066C	TAF2	P23255	1407 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	FMP49	A0A023PZB3	126 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	QCR2	P07257	368 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	MRS4	P23500	304 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	CDC39	P25655	2108 aa	Known RBP	0.72	□□□□□ -2.29
RTR2	YDR066C	SRP21	P32342	167 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	ATG8	P38182	117 aa	RIP-Chip data	0.72	□□□□□ -2.29	not detected
RTR2	YDR066C	YBR027C	P38220	110 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	AME1	P38313	324 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	SLM6	P38343	150 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	APQ12	P40532	138 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	FIP1	P45976	327 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	EFG1	Q3E705	233 aa	Known RBP	0.72	□□□□□ -2.29
RTR2	YDR066C	CMC4	Q3E7A9	73 aa		0.72	□□□□□ -2.29
RTR2	YDR066C	ADE6	P38972	1358 aa	Known RBP	0.71	□□□□□ -2.3
RTR2	YDR066C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.71	□□□□□ -2.3
RTR2	YDR066C	YCR001W	P25347	104 aa		0.71	□□□□□ -2.3
RTR2	YDR066C	YEL014C	P39999	101 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms