RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR008C	YDR008C	SRP14	P38985	146 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	POG1	P40473	351 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	YJR015W	P47090	510 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	TTI2	P47168	421 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	UIP4	Q08926	304 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	CCW12	Q12127	133 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	FCY1	Q12178	158 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	YOR381W-A	Q3E804	55 aa		0.49	□□□□□ -2.33
YDR008C	YDR008C	NUF2	P33895	451 aa		0.48	□□□□□ -2.33
YDR008C	YDR008C	CPR5	P35176	225 aa		0.48	□□□□□ -2.33
YDR008C	YDR008C	FYV4	P38783	130 aa	Predicted RBP	0.48	□□□□□ -2.33
YDR008C	YDR008C	YGR269W	P40326	108 aa		0.48	□□□□□ -2.33
YDR008C	YDR008C	GEP7	P53171	287 aa		0.48	□□□□□ -2.33
YDR008C	YDR008C	YDC1	Q02896	317 aa		0.48	□□□□□ -2.33
YDR008C	YDR008C	VAM10	Q08474	114 aa		0.48	□□□□□ -2.33
YDR008C	YDR008C	GRE1	Q08969	168 aa		0.48	□□□□□ -2.33
YDR008C	YDR008C	CMD1	P06787	147 aa	Known RBP	0.47	□□□□□ -2.33
YDR008C	YDR008C	PTC1	P35182	281 aa		0.47	□□□□□ -2.33
YDR008C	YDR008C	YKR070W	P36151	352 aa	Known RBP	0.47	□□□□□ -2.33
YDR008C	YDR008C	YEL073C	P39974	107 aa		0.47	□□□□□ -2.33
YDR008C	YDR008C	YEL028W	P39989	153 aa		0.47	□□□□□ -2.33
YDR008C	YDR008C	CIN5	P40917	295 aa		0.47	□□□□□ -2.33
YDR008C	YDR008C	TMA20	P89886	181 aa	Predicted RBP	0.47	□□□□□ -2.33
YDR008C	YDR008C	LIP1	Q03579	150 aa		0.47	□□□□□ -2.33
YDR008C	YDR008C	SYM1	Q06563	197 aa		0.47	□□□□□ -2.33
YDR008C	YDR008C	RIF1	P29539	1916 aa		0.46	□□□□□ -2.34
YDR008C	YDR008C	RPS25B	P0C0T4	108 aa	Known RBP	0.46	□□□□□ -2.34
YDR008C	YDR008C	SHB17	P36136	271 aa	Known RBP	0.46	□□□□□ -2.34
YDR008C	YDR008C	SOL1	P50278	321 aa		0.46	□□□□□ -2.34
YDR008C	YDR008C	NQM1	P53228	333 aa	Predicted RBP	0.46	□□□□□ -2.34
YDR008C	YDR008C	AVO2	Q04749	426 aa		0.46	□□□□□ -2.34
YDR008C	YDR008C	ATG38	Q05789	226 aa	Known RBP	0.46	□□□□□ -2.34
YDR008C	YDR008C	KEI1	Q06346	221 aa		0.46	□□□□□ -2.34
YDR008C	YDR008C	YLR050C	Q12155	161 aa	Known RBP	0.46	□□□□□ -2.34
YDR008C	YDR008C	RPS25A	Q3E792	108 aa	Predicted RBP	0.46	□□□□□ -2.34
YDR008C	YDR008C	TAF2	P23255	1407 aa		0.46	□□□□□ -2.34
YDR008C	YDR008C	EGD2	P38879	174 aa	Known RBP	0.45	□□□□□ -2.34
YDR008C	YDR008C	YNL200C	P40165	246 aa	Known RBP	0.45	□□□□□ -2.34
YDR008C	YDR008C	APS3	P47064	194 aa		0.45	□□□□□ -2.34
YDR008C	YDR008C	PAC10	P48363	199 aa		0.45	□□□□□ -2.34
YDR008C	YDR008C	TMA23	Q03525	211 aa		0.45	□□□□□ -2.34
YDR008C	YDR008C	YLR046C	Q12253	270 aa		0.45	□□□□□ -2.34
YDR008C	YDR008C	KIN28	P06242	306 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	SPS2	P08459	502 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	YCR001W	P25347	104 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	RAD51	P25454	400 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	SRP102	P36057	244 aa	Predicted RBP	0.44	□□□□□ -2.34
YDR008C	YDR008C	CSH1	P38287	376 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	YGL230C	P53074	147 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	YIP3	P53633	176 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	YNL140C	P53910	189 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	YDR476C	Q03362	224 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	GRX3	Q03835	250 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	THI74	Q04083	370 aa		0.44	□□□□□ -2.34
YDR008C	YDR008C	ADE6	P38972	1358 aa	Known RBP	0.44	□□□□□ -2.34
YDR008C	YDR008C	SPA2	P23201	1466 aa	Known RBP	0.43	□□□□□ -2.34
YDR008C	YDR008C	CDC39	P25655	2108 aa	Known RBP	0.43	□□□□□ -2.34
YDR008C	YDR008C	MAK3	Q03503	176 aa		0.43	□□□□□ -2.34
YDR008C	YDR008C	YHR213W-B	Q8TGK1	99 aa		0.43	□□□□□ -2.34
YDR008C	YDR008C	YGL041W-A	P0C5N3	154 aa		0.42	□□□□□ -2.34
YDR008C	YDR008C	VPS51	P36116	164 aa		0.42	□□□□□ -2.34
YDR008C	YDR008C	ECM31	P38122	312 aa		0.42	□□□□□ -2.34
YDR008C	YDR008C	YEL014C	P39999	101 aa		0.42	□□□□□ -2.34
YDR008C	YDR008C	YNR064C	P53750	290 aa		0.42	□□□□□ -2.34
YDR008C	YDR008C	YNL122C	P53921	115 aa	Predicted RBP	0.42	□□□□□ -2.34
YDR008C	YDR008C	ATG10	Q07879	167 aa		0.42	□□□□□ -2.34
YDR008C	YDR008C	YOR072W	Q08486	104 aa		0.42	□□□□□ -2.34
YDR008C	YDR008C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.41	□□□□□ -2.34
YDR008C	YDR008C	HYP2	P23301	157 aa	Known RBP	0.41	□□□□□ -2.34
YDR008C	YDR008C	SPT14	P32363	452 aa		0.41	□□□□□ -2.34
YDR008C	YDR008C	YBR027C	P38220	110 aa		0.41	□□□□□ -2.34
YDR008C	YDR008C	YGL101W	P53144	215 aa		0.41	□□□□□ -2.34
YDR008C	YDR008C	SAC3	P46674	1301 aa		0.4	□□□□□ -2.34
YDR008C	YDR008C	ATP5	P09457	212 aa		0.4	□□□□□ -2.35
YDR008C	YDR008C	YPT31	P38555	223 aa	Known RBP	0.4	□□□□□ -2.35
YDR008C	YDR008C	HTD2	P38790	280 aa	Known RBP	0.4	□□□□□ -2.35
YDR008C	YDR008C	CCC1	P47818	322 aa		0.4	□□□□□ -2.35
YDR008C	YDR008C	YGL193C	P53097	103 aa		0.4	□□□□□ -2.35
YDR008C	YDR008C	INO4	P13902	151 aa		0.39	□□□□□ -2.35
YDR008C	YDR008C	HSP150	P32478	413 aa		0.39	□□□□□ -2.35
YDR008C	YDR008C	HSK3	P69852	69 aa		0.39	□□□□□ -2.35
YDR008C	YDR008C	MGR2	Q02889	113 aa		0.39	□□□□□ -2.35
YDR008C	YDR008C	GIM5	Q04493	163 aa		0.39	□□□□□ -2.35
YDR008C	YDR008C	YPR114W	Q06107	315 aa		0.39	□□□□□ -2.35
YDR008C	YDR008C	NMA1	Q06178	401 aa	Known RBP	0.39	□□□□□ -2.35
YDR008C	YDR008C	YDL241W	Q07738	123 aa		0.39	□□□□□ -2.35
YDR008C	YDR008C	HAP2	P06774	265 aa		0.38	□□□□□ -2.35
YDR008C	YDR008C	RPS22A	P0C0W1	130 aa	Known RBP	0.38	□□□□□ -2.35
YDR008C	YDR008C	RPL35A	P0CX84	120 aa	Known RBP	0.38	□□□□□ -2.35
YDR008C	YDR008C	RPL35B	P0CX85	120 aa	Known RBP	0.38	□□□□□ -2.35
YDR008C	YDR008C	FES1	P38260	290 aa		0.38	□□□□□ -2.35
YDR008C	YDR008C	LSM3	P57743	89 aa	Known RBP	0.38	□□□□□ -2.35
YDR008C	YDR008C	ATP19	P81451	68 aa		0.38	□□□□□ -2.35
YDR008C	YDR008C	SED1	Q01589	338 aa		0.38	□□□□□ -2.35
YDR008C	YDR008C	FMN1	Q03778	218 aa		0.38	□□□□□ -2.35
YDR008C	YDR008C	YLR053C	Q12026	108 aa		0.38	□□□□□ -2.35
YDR008C	YDR008C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.38	□□□□□ -2.35
YDR008C	YDR008C	QCR2	P07257	368 aa		0.37	□□□□□ -2.35
YDR008C	YDR008C	RPS28B	P0C0X0	67 aa	Known RBP	0.37	□□□□□ -2.35
YDR008C	YDR008C	PBI2	P0CT04	75 aa	Known RBP	0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms