RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YBR184WP38299 523 aa6.59□□□□□ -1.35
ABP1YCR088W YPL067CQ02754 198 aa6.59□□□□□ -1.35
ABP1YCR088W YOR029WQ12243 111 aa6.59□□□□□ -1.35
ABP1YCR088W YDL085C-AQ3E7B7 68 aaKnown RBP6.59□□□□□ -1.35
ABP1YCR088W SEN1Q00416 2231 aaKnown RBP6.59□□□□□ -1.35
ABP1YCR088W YLR302CO13544 120 aa6.59□□□□□ -1.35
ABP1YCR088W RPL35AP0CX84 120 aaKnown RBP6.59□□□□□ -1.35
ABP1YCR088W RPL35BP0CX85 120 aaKnown RBP6.59□□□□□ -1.35
ABP1YCR088W TCA17P32613 152 aa6.59□□□□□ -1.35
ABP1YCR088W YJL028WP47062 111 aa6.59□□□□□ -1.35
ABP1YCR088W UBC13P52490 153 aa6.59□□□□□ -1.35
ABP1YCR088W SAE3P89114 91 aa6.59□□□□□ -1.35
ABP1YCR088W YTH1Q06102 208 aaPredicted RBP6.59□□□□□ -1.35
ABP1YCR088W TRA1P38811 3744 aa6.59□□□□□ -1.36
ABP1YCR088W GAR1P28007 205 aaKnown RBP6.58□□□□□ -1.36
ABP1YCR088W CPR5P35176 225 aa6.58□□□□□ -1.36
ABP1YCR088W RPB11P38902 120 aa6.58□□□□□ -1.36
ABP1YCR088W RPS26AP39938 119 aaKnown RBP6.58□□□□□ -1.36
ABP1YCR088W RPS26BP39939 119 aaKnown RBP6.58□□□□□ -1.36
ABP1YCR088W RPL9BP51401 191 aaKnown RBP6.58□□□□□ -1.36
ABP1YCR088W DUG3P53871 357 aa6.58□□□□□ -1.36
ABP1YCR088W YCL001W-BQ96VH2 84 aa6.58□□□□□ -1.36
ABP1YCR088W TOM40P23644 387 aaKnown RBP6.57□□□□□ -1.36
ABP1YCR088W CSI2Q08054 341 aa6.57□□□□□ -1.36
ABP1YCR088W NOP1P15646 327 aaKnown RBP6.57□□□□□ -1.36
ABP1YCR088W QRI5P32344 111 aa6.57□□□□□ -1.36
ABP1YCR088W NNK1P36003 928 aa6.57□□□□□ -1.36
ABP1YCR088W RAV2Q03956 351 aa6.57□□□□□ -1.36
ABP1YCR088W MCH1Q07376 486 aa6.57□□□□□ -1.36
ABP1YCR088W GAT3Q07928 141 aa6.57□□□□□ -1.36
ABP1YCR088W TPT1Q12272 230 aaKnown RBP6.57□□□□□ -1.36
ABP1YCR088W RPP2BP02400 110 aaKnown RBP6.56□□□□□ -1.36
ABP1YCR088W HEM4P06174 275 aa6.56□□□□□ -1.36
ABP1YCR088W PIS1P06197 220 aaKnown RBP6.56□□□□□ -1.36
ABP1YCR088W ACP1P32463 125 aa6.56□□□□□ -1.36
ABP1YCR088W RAD23P32628 398 aaKnown RBP6.56□□□□□ -1.36
ABP1YCR088W YKL102CP34249 101 aa6.56□□□□□ -1.36
ABP1YCR088W MIX23P38162 196 aa6.56□□□□□ -1.36
ABP1YCR088W AME1P38313 324 aa6.56□□□□□ -1.36
ABP1YCR088W PIR5P46999 287 aa6.56□□□□□ -1.36
ABP1YCR088W SEC4P07560 215 aaKnown RBP6.55□□□□□ -1.36
ABP1YCR088W SOH1P38633 127 aa6.55□□□□□ -1.36
ABP1YCR088W GLC8P41818 229 aa6.55□□□□□ -1.36
ABP1YCR088W RPA43P46669 326 aa6.55□□□□□ -1.36
ABP1YCR088W CSM4Q08955 156 aa6.55□□□□□ -1.36
ABP1YCR088W RPL39P04650 51 aa6.54□□□□□ -1.36
ABP1YCR088W DFR1P07807 211 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
ABP1YCR088W GSP1P32835 219 aaKnown RBP6.54□□□□□ -1.36
ABP1YCR088W GSP2P32836 220 aaKnown RBP6.54□□□□□ -1.36
ABP1YCR088W YAR068WP39564 161 aa6.54□□□□□ -1.36
ABP1YCR088W TOM7P53507 60 aa6.54□□□□□ -1.36
ABP1YCR088W YOL024WQ08172 172 aa6.54□□□□□ -1.36
ABP1YCR088W TMA7Q3E764 64 aaKnown RBP6.54□□□□□ -1.36
ABP1YCR088W PAU16P35994 123 aa6.54□□□□□ -1.36
ABP1YCR088W TEM1P38987 245 aa6.54□□□□□ -1.36
ABP1YCR088W UME6P39001 836 aa6.54□□□□□ -1.36
ABP1YCR088W SAS2P40963 338 aa6.54□□□□□ -1.36
ABP1YCR088W YMR105W-AQ8TGS8 64 aa6.54□□□□□ -1.36
ABP1YCR088W YKL187CP34231 750 aa6.53□□□□□ -1.36
ABP1YCR088W YFL051CP43552 160 aa6.53□□□□□ -1.36
ABP1YCR088W FIT2Q08906 153 aa6.53□□□□□ -1.36
ABP1YCR088W YDL157CQ12082 118 aa6.53□□□□□ -1.36
ABP1YCR088W RPS22BQ3E7Y3 130 aaKnown RBP6.53□□□□□ -1.36
ABP1YCR088W RPB10P22139 70 aa6.52□□□□□ -1.37
ABP1YCR088W FZF1P32805 299 aa6.52□□□□□ -1.37
ABP1YCR088W LSM2P38203 95 aaKnown RBP6.52□□□□□ -1.37
ABP1YCR088W YGP1P38616 354 aaKnown RBP6.52□□□□□ -1.37
ABP1YCR088W YHR173CP38864 112 aa6.52□□□□□ -1.37
ABP1YCR088W UIP3P39547 235 aa6.52□□□□□ -1.37
ABP1YCR088W PRE5P40302 234 aaKnown RBP6.52□□□□□ -1.37
ABP1YCR088W YJL118WP47022 219 aa6.52□□□□□ -1.37
ABP1YCR088W TDA4P47153 279 aa6.52□□□□□ -1.37
ABP1YCR088W YNR071CP53757 342 aa6.52□□□□□ -1.37
ABP1YCR088W RPL31AP0C2H8 113 aaKnown RBP6.52□□□□□ -1.37
ABP1YCR088W RPL31BP0C2H9 113 aaKnown RBP6.52□□□□□ -1.37
ABP1YCR088W HMRA1P0CY11 126 aa6.52□□□□□ -1.37
ABP1YCR088W HSP12P22943 109 aaKnown RBP6.52□□□□□ -1.37
ABP1YCR088W DOG1P38774 246 aa6.52□□□□□ -1.37
ABP1YCR088W HTB1P02293 131 aaKnown RBP6.51□□□□□ -1.37
ABP1YCR088W YER190C-BP0CX94 160 aa6.51□□□□□ -1.37
ABP1YCR088W YEL077W-AP0CX95 160 aa6.51□□□□□ -1.37
ABP1YCR088W YGR296C-BP0CX96 160 aa6.51□□□□□ -1.37
ABP1YCR088W YPL283W-BP0CX97 160 aa6.51□□□□□ -1.37
ABP1YCR088W YPR204C-AP0CX98 160 aa6.51□□□□□ -1.37
ABP1YCR088W YCR022CP25620 114 aa6.51□□□□□ -1.37
ABP1YCR088W ZRT1P32804 376 aa6.51□□□□□ -1.37
ABP1YCR088W PMU1P36069 295 aa6.51□□□□□ -1.37
ABP1YCR088W CSH1P38287 376 aa6.51□□□□□ -1.37
ABP1YCR088W YFL054CP43549 646 aa6.51□□□□□ -1.37
ABP1YCR088W SDS23P53172 527 aa6.51□□□□□ -1.37
ABP1YCR088W YGR018CP53211 109 aa6.51□□□□□ -1.37
ABP1YCR088W ATP19P81451 68 aa6.51□□□□□ -1.37
ABP1YCR088W SCS22Q6Q595 175 aa6.51□□□□□ -1.37
ABP1YCR088W VMA16P23968 213 aa6.5□□□□□ -1.37
ABP1YCR088W DOG2P38773 246 aa6.5□□□□□ -1.37
ABP1YCR088W BDH1P39714 382 aa6.5□□□□□ -1.37
ABP1YCR088W YER188WP40103 239 aa6.5□□□□□ -1.37
ABP1YCR088W COX18P53239 316 aa6.5□□□□□ -1.37
ABP1YCR088W TRI1Q05024 226 aa6.5□□□□□ -1.37
ABP1YCR088W LDB16P25587 256 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms