RNA–Protein interactions for RNA: YBR098W

MMS4, Transcript of Subunit of structure-specific Mms4p-Mus81p endonuclease, yeast

Gene MMS4, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS4	YBR098W	YPR203W	Q08994	102 aa		0.45	□□□□□ -2.34
MMS4	YBR098W	RIF1	P29539	1916 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	RAD6	P06104	172 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	UBI4	P0CG63	381 aa	Known RBP	0.44	□□□□□ -2.34
MMS4	YBR098W	MRPL15	P36523	253 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	YBR242W	P38331	238 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	SLM6	P38343	150 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	YFL051C	P43552	160 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	YGL101W	P53144	215 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	MAK31	P23059	88 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	PTC1	P35182	281 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	SHB17	P36136	271 aa	Known RBP	0.44	□□□□□ -2.34
MMS4	YBR098W	CCC1	P47818	322 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	TIM13	P53299	105 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	FIT1	Q04433	528 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	RDI1	Q12434	202 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	YMR030W-A	Q3E760	96 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	CMC4	Q3E7A9	73 aa		0.44	□□□□□ -2.34
MMS4	YBR098W	CDC39	P25655	2108 aa	Known RBP	0.44	□□□□□ -2.34
MMS4	YBR098W	TRM3	Q07527	1436 aa		0.43	□□□□□ -2.34
MMS4	YBR098W	CMD1	P06787	147 aa	Known RBP	0.43	□□□□□ -2.34
MMS4	YBR098W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	not detected
MMS4	YBR098W	AME1	P38313	324 aa		0.43	□□□□□ -2.34
MMS4	YBR098W	SMD2	Q06217	110 aa	Known RBP	0.43	□□□□□ -2.34
MMS4	YBR098W	YLR046C	Q12253	270 aa		0.43	□□□□□ -2.34
MMS4	YBR098W	CMC2	Q3E7A4	109 aa		0.43	□□□□□ -2.34
MMS4	YBR098W	UBR1	P19812	1950 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	INO4	P13902	151 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	MRS4	P23500	304 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	AHT1	P29589	182 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	YGR269W	P40326	108 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	XPT1	P47165	209 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	PAC10	P48363	199 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	SBH2	P52871	88 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	LIP1	Q03579	150 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	YDR102C	Q03864	110 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	PLP1	Q04004	230 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	YPR114W	Q06107	315 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	RPL30	P14120	105 aa	Known RBP	0.42	□□□□□ -2.34
MMS4	YBR098W	UBC8	P28263	218 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	MOB1	P40484	314 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	FIP1	P45976	327 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	RPL37B	P51402	88 aa	Known RBP	0.42	□□□□□ -2.34
MMS4	YBR098W	LCL2	Q08045	131 aa		0.42	□□□□□ -2.34
MMS4	YBR098W	ATP5	P09457	212 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	NUF2	P33895	451 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	YPT31	P38555	223 aa	Known RBP	0.41	□□□□□ -2.34
MMS4	YBR098W	YJL218W	P40892	196 aa	Known RBP	0.41	□□□□□ -2.34
MMS4	YBR098W	NQM1	P53228	333 aa	Predicted RBP	0.41	□□□□□ -2.34
MMS4	YBR098W	LSM3	P57743	89 aa	Known RBP	0.41	□□□□□ -2.34
MMS4	YBR098W	YDL157C	Q12082	118 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	QCR2	P07257	368 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	HSP150	P32478	413 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	FES1	P38260	290 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	HTD2	P38790	280 aa	Known RBP	0.41	□□□□□ -2.34
MMS4	YBR098W	YGL193C	P53097	103 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	YNR064C	P53750	290 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	HHT1	P61830	136 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	YML079W	Q03629	201 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	YMR007W	Q03675	126 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	ATG10	Q07879	167 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	HRD1	Q08109	551 aa		0.41	□□□□□ -2.34
MMS4	YBR098W	SPS2	P08459	502 aa		0.4	□□□□□ -2.35
MMS4	YBR098W	RPS28B	P0C0X0	67 aa	Known RBP	0.4	□□□□□ -2.35
MMS4	YBR098W	VPS51	P36116	164 aa		0.4	□□□□□ -2.35
MMS4	YBR098W	DER1	P38307	211 aa		0.4	□□□□□ -2.35
MMS4	YBR098W	TMA20	P89886	181 aa	Predicted RBP	0.4	□□□□□ -2.35
MMS4	YBR098W	UIP4	Q08926	304 aa		0.4	□□□□□ -2.35
MMS4	YBR098W	YLR053C	Q12026	108 aa		0.4	□□□□□ -2.35
MMS4	YBR098W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.4	□□□□□ -2.35
MMS4	YBR098W	TAF2	P23255	1407 aa		0.4	□□□□□ -2.35
MMS4	YBR098W	SPT14	P32363	452 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	YKR070W	P36151	352 aa	Known RBP	0.39	□□□□□ -2.35
MMS4	YBR098W	YEL014C	P39999	101 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	APQ12	P40532	138 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	CCW12	Q12127	133 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	FCY1	Q12178	158 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	SPA2	P23201	1466 aa	Known RBP	0.39	□□□□□ -2.35
MMS4	YBR098W	RPS25B	P0C0T4	108 aa	Known RBP	0.39	□□□□□ -2.35
MMS4	YBR098W	YER188C-A	P0C0V2	99 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	PEX34	P25584	144 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	YGL230C	P53074	147 aa		0.39	□□□□□ -2.35
MMS4	YBR098W	RPS25A	Q3E792	108 aa	Predicted RBP	0.39	□□□□□ -2.35
MMS4	YBR098W	UGX2	P32772	223 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	UBC6	P33296	250 aa	Predicted RBP	0.38	□□□□□ -2.35
MMS4	YBR098W	YBR027C	P38220	110 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	IPT1	P38954	527 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	YAR064W	P39563	99 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	DLS1	P40366	167 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	CIN5	P40917	295 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	GRX5	Q02784	150 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	NSL1	Q12143	216 aa		0.38	□□□□□ -2.35
MMS4	YBR098W	ADE6	P38972	1358 aa	Known RBP	0.38	□□□□□ -2.35
MMS4	YBR098W	KIN28	P06242	306 aa		0.37	□□□□□ -2.35
MMS4	YBR098W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.37	□□□□□ -2.35
MMS4	YBR098W	PHO13	P19881	312 aa		0.37	□□□□□ -2.35
MMS4	YBR098W	YER181C	P40097	107 aa		0.37	□□□□□ -2.35
MMS4	YBR098W	GLC8	P41818	229 aa		0.37	□□□□□ -2.35
MMS4	YBR098W	DCV1	P43595	202 aa		0.37	□□□□□ -2.35
MMS4	YBR098W	MAK3	Q03503	176 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms