RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SH2D3AQ9BRG2 576 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 PDCD2LQ9BRP1 358 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 DNM3Q9UQ16 869 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 LRRC42Q9Y546 428 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 TMEM150BA6NC51 233 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 NELFEP18615 380 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ASPHQ12797 758 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 SPARCL1Q14515 664 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 KAZNQ674X7 775 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 PPP1R21Q6ZMI0 780 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 GUF1Q8N442 669 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 GALNT4Q8N4A0 578 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ZFAND2BQ8WV99 257 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 UTP4Q969X6 686 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 RUNDC3BQ96NL0 473 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 MRGBPQ9NV56 204 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ATP5HO75947 161 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 RGS20O76081 388 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 PSMG1O95456 288 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 FKBP3Q00688 224 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 KCNA1Q09470 495 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 MTMR1Q13613 665 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 SMAD1Q15797 465 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 SGSM1Q2NKQ1 1148 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 SGO2Q562F6 1265 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ACSBG2Q5FVE4 666 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 SH3D19Q5HYK7 790 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ZNF571Q7Z3V5 609 aaPredicted RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 TPCN2Q8NHX9 752 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 CNBD2Q96M20 576 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ANAPC5Q9UJX4 755 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 RABGAP1Q9Y3P9 1069 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 RIPK2O43353 540 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 GAS8O95995 478 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 TFPTP0C1Z6 253 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 EPHX2P34913 555 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 SYCP2LQ5T4T6 812 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 RINT1Q6NUQ1 792 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 MARK2Q7KZI7 788 aaKnown RBP12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 SAPCD2Q86UD0 394 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 SFR1Q86XK3 245 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 TRIML2Q8N7C3 387 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 SLC35G2Q8TBE7 412 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 BTBD6Q96KE9 485 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 LRRC27Q9C0I9 530 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 CHKBQ9Y259 395 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 CTDP1Q9Y5B0 961 aaPredicted RBP12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 AK5Q9Y6K8 562 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 BRCA2P51587 3418 aa12.46□□□□□ -0.41
RBFOX1-224ENST00000641259 MYOCOSA0A1B0GUC4 107 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 MEI4A8MW99 385 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 PEX1O43933 1283 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 MYBP10242 640 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 HARSP12081 509 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 PLS3P13797 630 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 ZFXP17010 805 aaPredicted RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 PSMC1P62191 440 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 UGCGQ16739 394 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 CROCCP2Q86T23 111 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 CATSPER2Q96P56 530 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 LXNQ9BS40 222 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 KLHL4Q9C0H6 718 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 KCTD10Q9H3F6 313 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 EHMT1Q9H9B1 1298 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 IKBKGQ9Y6K9 419 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 KIAA1217Q5T5P2 1943 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 SRRM3A6NNA2 597 aaPredicted RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 TLR2O60603 784 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 CCDC22O60826 627 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 PAEPP09466 180 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 ATF2P15336 505 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 ECHS1P30084 290 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 ARFIP2P53365 341 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 NAA20P61599 178 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 NOP14P78316 857 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 TBL3Q12788 808 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 LPCAT4Q643R3 524 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 DNAJC14Q6Y2X3 702 aaPredicted RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 RNF169Q8NCN4 708 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 USP6NLQ92738 828 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 TLCD1Q96CP7 247 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 TEKT3Q9BXF9 490 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 TTYH3Q9C0H2 523 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 ASCC2Q9H1I8 757 aaPredicted RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 LIN28AQ9H9Z2 209 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 PARP2Q9UGN5 583 aa12.46□□□□□ -0.42
RBFOX1-224ENST00000641259 PFASO15067 1338 aa12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 SSU72P8A0A1W2PR75 194 aa12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 EYA4O95677 639 aa12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 CCNE2O96020 404 aa12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 BCRP11274 1271 aa12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 CLCN2P51788 898 aa12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 PPIDQ08752 370 aaKnown RBP12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 ARHGEF16Q5VV41 709 aa12.45□□□□□ -0.42
RBFOX1-224ENST00000641259 OR52E8Q6IFG1 317 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms