RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SDCBP2Q9H190 292 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 LHX5Q9H2C1 402 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 PDZD7Q9H5P4 517 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 AKT3Q9Y243 479 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 SRCAPQ6ZRS2 3230 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 RBM47A0AV96 593 aaKnown RBP18.05■□□□□ 0.48
PHGDH-211ENST00000641213 ANKRD65E5RJM6 399 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 RGS16O15492 202 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-211ENST00000641213 FAM107AO95990 144 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 KRT1P04264 644 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 PAEPP09466 180 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 ZNF286BP0CG31 522 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 KRT10P13645 584 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 RAD23BP54727 409 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CORO7P57737 925 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 MFSD7Q6UXD7 560 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 NIPA2Q8N8Q9 360 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CXorf38Q8TB03 319 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 TRAIPQ9BWF2 469 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CNOT10Q9H9A5 744 aaKnown RBP18.05■□□□□ 0.48
PHGDH-211ENST00000641213 CYTH4Q9UIA0 394 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 ANAPC5Q9UJX4 755 aa18.05■□□□□ 0.48
PHGDH-211ENST00000641213 TRIM66O15016 1216 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 MED7O43513 233 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 TRAPPC3O43617 180 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 VTNP04004 478 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 ITGB3P05106 788 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 VPS41P49754 854 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 IFI35P80217 286 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-211ENST00000641213 PTPN20Q4JDL3 420 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 ZFYVE27Q5T4F4 411 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 KAZNQ674X7 775 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 TXNRD3NBQ6F5E7 133 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 ZNF365Q70YC5 407 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 TSPYL1Q9H0U9 437 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 STRIP2Q9ULQ0 834 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 COL1A2P08123 1366 aa18.04■□□□□ 0.48
PHGDH-211ENST00000641213 GMNCA6NCL1 334 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 PDHXO00330 501 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 RASGRF2O14827 1237 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 AGTP01019 485 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 ATF7P17544 494 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-211ENST00000641213 ARF4P18085 180 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-211ENST00000641213 ADCYAP1R1P41586 468 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 SPOCD1Q6ZMY3 1216 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 B4GALNT4Q76KP1 1039 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 CCDC89Q8N998 374 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 RAPGEF5Q92565 580 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-211ENST00000641213 FAXDC2Q96IV6 333 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 C16orf70Q9BSU1 422 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 KATNBL1Q9H079 304 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 SMYD3Q9H7B4 428 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 TJP2Q9UDY2 1190 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 FAM169AQ9Y6X4 670 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 LIASO43766 372 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 KLRC2P26717 231 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 POLR2BP30876 1174 aaKnown RBP18.03■□□□□ 0.48
PHGDH-211ENST00000641213 MMP13P45452 471 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 SLCO1A2P46721 670 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 COPS2P61201 443 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 ORC1Q13415 861 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 SLC10A6Q3KNW5 377 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 TNFAIP8L3Q5GJ75 292 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 MTHFD1LQ6UB35 978 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 SLC4A11Q8NBS3 891 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 MDM1Q8TC05 714 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 ROPN1BQ9BZX4 212 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-211ENST00000641213 ASB7Q9H672 318 aa18.03■□□□□ 0.48
PHGDH-211ENST00000641213 ROPN1Q9HAT0 212 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-211ENST00000641213 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-211ENST00000641213 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-211ENST00000641213 SIGLEC16A6NMB1 481 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 GOLGA8SH3BPF8 625 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 TJP3O95049 919 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 ACSL3O95573 720 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 PTPN7P35236 360 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 RFC1P35251 1148 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-211ENST00000641213 CDR1P51861 262 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 AUHQ13825 339 aaKnown RBP18.02■□□□□ 0.48
PHGDH-211ENST00000641213 C10orf67Q8IYJ2 551 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 BBOF1Q8ND07 529 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 ACSF2Q96CM8 615 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-211ENST00000641213 TWNKQ96RR1 684 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 DDX56Q9NY93 547 aaKnown RBP18.02■□□□□ 0.48
PHGDH-211ENST00000641213 HMGXB4Q9UGU5 601 aa18.02■□□□□ 0.48
PHGDH-211ENST00000641213 RALGAPA2Q2PPJ7 1873 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 TTC4O95801 387 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 ATICP31939 592 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 LMNB2Q03252 620 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 MFSD5Q6N075 450 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 DRICH1Q6PGQ1 229 aaPredicted RBP18.02■□□□□ 0.47
PHGDH-211ENST00000641213 GSTA5Q7RTV2 222 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 PRUNE1Q86TP1 453 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 CENPTQ96BT3 561 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 MS4A4AQ96JQ5 239 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 ELOVL4Q9GZR5 314 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 FAM107BQ9H098 131 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 ADAM7Q9H2U9 754 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 VRTNQ9H8Y1 702 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms