RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 CEP57Q86XR8 500 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 CCDC170Q8IYT3 715 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 THEM5Q8N1Q8 247 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 COLGALT1Q8NBJ5 622 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 SLC4A11Q8NBS3 891 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 EPS8L1Q8TE68 723 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 BCL7CQ8WUZ0 217 aaPredicted RBP9.34□□□□□ -0.91
HLA-B-258ENST00000640615 GPR62Q9BZJ7 368 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 PDCL3Q9H2J4 239 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 DPEP3Q9H4B8 488 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 AAASQ9NRG9 546 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 SPG21Q9NZD8 308 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 ADAMTS1Q9UHI8 967 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 NOCTQ9UK39 431 aaKnown RBP9.34□□□□□ -0.91
HLA-B-258ENST00000640615 NME7Q9Y5B8 376 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 EPN1Q9Y6I3 576 aaPredicted RBP9.34□□□□□ -0.91
HLA-B-258ENST00000640615 MICAL3Q7RTP6 2002 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 SF3B1O75533 1304 aaKnown RBP eCLIP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 CARNS1A5YM72 827 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 GABRDO14764 452 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SYN3O14994 580 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 MED7O43513 233 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 NDUFA10O95299 355 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 IPO7O95373 1038 aaKnown RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 CYP11A1P05108 521 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 MMEP08473 750 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 VDRP11473 427 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 CHRNB2P17787 502 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 TYMPP19971 482 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 ACAT1P24752 427 aaKnown RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 ANXA13P27216 316 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 TKTP29401 623 aaKnown RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SSTR3P32745 418 aaPredicted RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 KIF11P52732 1056 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 RABGGTBP53611 331 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 PSMC1P62191 440 aaKnown RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 CDR2Q01850 454 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 YWHAHQ04917 246 aaPredicted RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 GFPT1Q06210 699 aaPredicted RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SPA17Q15506 151 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 OVOS1Q6IE37 1185 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 FUT10Q6P4F1 479 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 ZNF677Q86XU0 584 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 GLYCTKQ8IVS8 523 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SLC39A11Q8N1S5 342 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SPATA18Q8TC71 538 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 ZNF606Q8WXB4 792 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 TFAP2BQ92481 460 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 DDX1Q92499 740 aaKnown RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 TMEM169Q96HH4 297 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 IGSF21Q96ID5 467 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 TNIP3Q96KP6 325 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 GUCD1Q96NT3 240 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SPTLC3Q9NUV7 552 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 KIAA1257Q9ULG3 409 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 PYCARDQ9ULZ3 195 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 PCDHB12Q9Y5F1 795 aa9.33□□□□□ -0.92
HLA-B-258ENST00000640615 PDCD11Q14690 1871 aaKnown RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 SPTBN5Q9NRC6 3674 aaKnown RBP9.33□□□□□ -0.92
HLA-B-258ENST00000640615 TRIP11Q15643 1979 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 CUL9Q8IWT3 2517 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 A0A087X0T9 212 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 LCHNA4D1U4 455 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 GRXCR1A8MXD5 290 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 EIF3CLB5ME19 914 aaKnown RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 DDX3XO00571 662 aaKnown RBP eCLIP9.32□□□□□ -0.923e-9■■□□□ 12.3
HLA-B-258ENST00000640615 ATP2C2O75185 946 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 FAM228BP0C875 321 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 PTPN1P18031 435 aaKnown RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 FGFR3P22607 806 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 PCSK1P29120 753 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 FMO1Q01740 532 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 CYP27A1Q02318 531 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 BMS1Q14692 1282 aaKnown RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 SLC18A3Q16572 532 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 ASTE1Q2TB18 679 aaPredicted RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 CCDC122Q5T0U0 273 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 TOGARAM2Q6ZUX3 1019 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 TAS1R1Q7RTX1 841 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 CRYBG2Q8N1P7 616 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 C12orf29Q8N999 325 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 LNX1Q8TBB1 728 aaPredicted RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 SP7Q8TDD2 431 aaPredicted RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 CYFIP2Q96F07 1278 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 B3GALT6Q96L58 329 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 PCDHB18PQ96TA0 734 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 EIF3CQ99613 913 aaKnown RBP9.32□□□□□ -0.92
HLA-B-258ENST00000640615 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 SYT15Q9BQS2 421 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 DESI2Q9BSY9 194 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 SYT11Q9BT88 431 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 TTPALQ9BTX7 342 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 FAM49BQ9NUQ9 324 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 CDH9Q9ULB4 789 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 PRUNE2Q8WUY3 3088 aa9.32□□□□□ -0.92
HLA-B-258ENST00000640615 CDH23Q9H251 3354 aa9.31□□□□□ -0.92
HLA-B-258ENST00000640615 FAM170AA1A519 330 aa9.31□□□□□ -0.92
HLA-B-258ENST00000640615 TMCO5BA8MYB1 307 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms