RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 MED16Q9Y2X0 877 aa6.9□□□□□ -1.31
RTTN-217ENST00000640393 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.9□□□□□ -1.31
RTTN-217ENST00000640393 MARCH11A6NNE9 402 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 MYO1FO00160 1098 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 TACR2P21452 398 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 MCM7P33993 719 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 GCLCP48506 637 aaPredicted RBP6.89□□□□□ -1.31
RTTN-217ENST00000640393 TOB1P50616 345 aaPredicted RBP6.89□□□□□ -1.31
RTTN-217ENST00000640393 ANXA11P50995 505 aaKnown RBP6.89□□□□□ -1.31
RTTN-217ENST00000640393 VAV2P52735 878 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 LONRF3Q496Y0 759 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 LMBRD2Q68DH5 695 aaPredicted RBP6.89□□□□□ -1.31
RTTN-217ENST00000640393 ADGRG5Q8IZF4 528 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 LARP4BQ92615 738 aaKnown RBP6.89□□□□□ -1.31
RTTN-217ENST00000640393 APIPQ96GX9 242 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 TBCCD1Q9NVR7 557 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 STK32BQ9NY57 414 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 CORO2BQ9UQ03 480 aa6.89□□□□□ -1.31
RTTN-217ENST00000640393 THP07101 528 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 NBPF7P0C2Y1 421 aaPredicted RBP6.88□□□□□ -1.31
RTTN-217ENST00000640393 ITGALP20701 1170 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 ZEB1P37275 1124 aaPredicted RBP6.88□□□□□ -1.31
RTTN-217ENST00000640393 NPTX2P47972 431 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 LILRA4P59901 499 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 IQCB1Q15051 598 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 POLD3Q15054 466 aaPredicted RBP6.88□□□□□ -1.31
RTTN-217ENST00000640393 TMEM108Q6UXF1 575 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 RHOUQ7L0Q8 258 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.88□□□□□ -1.31
RTTN-217ENST00000640393 PARD3BQ8TEW8 1205 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 KBTBD7Q8WVZ9 684 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 Q96MF0 132 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 MS4A7Q9GZW8 240 aaPredicted RBP6.88□□□□□ -1.31
RTTN-217ENST00000640393 CYP4F11Q9HBI6 524 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
RTTN-217ENST00000640393 TMEM74BQ9NUR3 256 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 HESX1Q9UBX0 185 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 HS3ST4Q9Y661 456 aa6.88□□□□□ -1.31
RTTN-217ENST00000640393 A0A1W2PS29 197 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 DCLK1O15075 740 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 PMM2O15305 246 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 FZD7O75084 574 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 PPFIA4O75335 1185 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 MYL1P05976 194 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 EN2P19622 333 aaPredicted RBP6.87□□□□□ -1.31
RTTN-217ENST00000640393 NDUFV1P49821 464 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 ZNF134P52741 427 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 ARFIP2P53365 341 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 ABHD18Q0P651 414 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 FSTL1Q12841 308 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 SF3B3Q15393 1217 aaKnown RBP6.87□□□□□ -1.31
RTTN-217ENST00000640393 MAP9Q49MG5 647 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 IL31Q6EBC2 164 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 ZNF627Q7L945 461 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 PPP1R32Q7Z5V6 425 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 FAM9AQ8IZU1 332 aaPredicted RBP6.87□□□□□ -1.31
RTTN-217ENST00000640393 SLC44A3Q8N4M1 653 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 TOR1AIP2Q8NFQ8 470 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 PJA1Q8NG27 643 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 SUCLG2Q96I99 432 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 TBCBQ99426 244 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 STK31Q9BXU1 1019 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 NUP62CLQ9H1M0 184 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 SMURF2Q9HAU4 748 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 INTS13Q9NVM9 706 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 NEU2Q9Y3R4 380 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 POLR2AP24928 1970 aaKnown RBP6.87□□□□□ -1.31
RTTN-217ENST00000640393 KAT6AQ92794 2004 aa6.87□□□□□ -1.31
RTTN-217ENST00000640393 RHPN2P1A8MT19 583 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 hCG_1984214I3L0E3 225 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 TRIM27P14373 513 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 RAB32Q13637 225 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 ARMC6Q6NXE6 501 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 MICALCLQ6ZW33 695 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 SESTD1Q86VW0 696 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 ZNF280BQ86YH2 543 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 CCDC146Q8IYE0 955 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 MAML1Q92585 1016 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 CAVIN3Q969G5 261 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 HEPHQ9BQS7 1158 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 SPATA5L1Q9BVQ7 753 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 TPSD1Q9BZJ3 242 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 ARNT2Q9HBZ2 717 aa6.86□□□□□ -1.31
RTTN-217ENST00000640393 MRPS17Q9Y2R5 130 aaKnown RBP6.86□□□□□ -1.31
RTTN-217ENST00000640393 A0A0B4J269 797 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 PIPSLA2A3N6 862 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 ISM1B1AKI9 464 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 TRIAP1O43715 76 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 RASSF9O75901 435 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 PIK3CBP42338 1070 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 NEK3P51956 506 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 RPS16P62249 146 aaKnown RBP6.85□□□□□ -1.31
RTTN-217ENST00000640393 KRT17Q04695 432 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 TUBB3Q13509 450 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 RBM20Q5T481 1227 aaKnown RBP6.85□□□□□ -1.31
RTTN-217ENST00000640393 SP5Q6BEB4 398 aaPredicted RBP6.85□□□□□ -1.31
RTTN-217ENST00000640393 SSH3Q8TE77 659 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 LPIN2Q92539 896 aa6.85□□□□□ -1.31
RTTN-217ENST00000640393 SCAND2PQ9GZW5 306 aaPredicted RBP6.85□□□□□ -1.31
RTTN-217ENST00000640393 ITGB1BP2Q9UKP3 347 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms