RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C3orf62Q6ZUJ4 267 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 CENPUQ71F23 418 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 LRRC71Q8N4P6 559 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 MICAL1Q8TDZ2 1067 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 RSAD2Q8WXG1 361 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 MAML1Q92585 1016 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 ZBTB10Q96DT7 871 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 MAK16Q9BXY0 300 aaKnown RBP15.38■□□□□ 0.05
SCARB2-221ENST00000640341 ZC3H11AO75152 810 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCARB2-221ENST00000640341 CSDE1O75534 798 aaKnown RBP15.38■□□□□ 0.05
SCARB2-221ENST00000640341 CTCFP49711 727 aaPredicted RBP15.38■□□□□ 0.05
SCARB2-221ENST00000640341 ZNF252P-AS1Q0IIN9 211 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 HIF1AQ16665 826 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 XKR3Q5GH77 459 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 PLEKHA7Q6IQ23 1121 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 ZC3H18Q86VM9 953 aaKnown RBP15.38■□□□□ 0.05
SCARB2-221ENST00000640341 PALM2Q8IXS6 379 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 ANKLE1Q8NAG6 615 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 ACTL9Q8TC94 416 aa15.38■□□□□ 0.05
SCARB2-221ENST00000640341 CD48P09326 243 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 OTUD4Q01804 1114 aaKnown RBP15.37■□□□□ 0.05
SCARB2-221ENST00000640341 WDR72Q3MJ13 1102 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 GNPTABQ3T906 1256 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 GALNTL6Q49A17 601 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 C15orf39Q6ZRI6 1047 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 RCOR2Q8IZ40 523 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 C17orf75Q9HAS0 396 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 CISHQ9NSE2 258 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 CHKBQ9Y259 395 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 C15orf41Q9Y2V0 281 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 STAM2O75886 525 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 GJB1P08034 283 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 PAX7P23759 505 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 GCAP28676 217 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 RFC1P35251 1148 aaPredicted RBP15.37■□□□□ 0.05
SCARB2-221ENST00000640341 GCLCP48506 637 aaPredicted RBP15.37■□□□□ 0.05
SCARB2-221ENST00000640341 LMNB2Q03252 620 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 EN1Q05925 392 aaPredicted RBP15.37■□□□□ 0.05
SCARB2-221ENST00000640341 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 GPRASP2Q96D09 838 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 UNC5CO95185 931 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 ASMTLO95671 621 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 EPHB2P29323 1055 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 ALDH3A1P30838 453 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 CDH8P55286 799 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 EAPPQ56P03 285 aaPredicted RBP15.37■□□□□ 0.05
SCARB2-221ENST00000640341 RTKN2Q8IZC4 609 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 FAM71DQ8N9W8 422 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 DEFB129Q9H1M3 183 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 PICK1Q9NRD5 415 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 CHMP2BQ9UQN3 213 aa15.37■□□□□ 0.05
SCARB2-221ENST00000640341 DKC1O60832 514 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCARB2-221ENST00000640341 STBD1O95210 358 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 ATP4AP20648 1035 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 MMP8P22894 467 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TAF5Q15542 800 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 SMAD1Q15797 465 aaKnown RBP15.36■□□□□ 0.05
SCARB2-221ENST00000640341 CDO1Q16878 200 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 MSS51Q4VC12 460 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TFDP3Q5H9I0 405 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TRIM50Q86XT4 487 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 ALLCQ8N6M5 410 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 CEP120Q8N960 986 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TMEM35BQ8NCS4 154 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TFAP2BQ92481 460 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 SLC24A3Q9HC58 644 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TMEM191CA6NGB0 347 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 C2orf71A6NGG8 1288 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 PLSCR1O15162 318 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 NEBLO76041 1014 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TMEM191BP0C7N4 346 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 ATP2A2P16615 1042 aaKnown RBP15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TAF1BQ53T94 588 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-221ENST00000640341 RFX8Q6ZV50 586 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 MTDHQ86UE4 582 aaKnown RBP15.36■□□□□ 0.05
SCARB2-221ENST00000640341 RFX6Q8HWS3 928 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 ARHGEF3Q9NR81 526 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 PRKAG3Q9UGI9 489 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 LGALS13Q9UHV8 139 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 KAT6AQ92794 2004 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TCRBV7S3A2A0A539 114 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 SUPT20HL2P0C7V6 817 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 FGFR1P11362 822 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 VCPP55072 806 aaKnown RBP15.36■□□□□ 0.05
SCARB2-221ENST00000640341 ZBTB16Q05516 673 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 SUPT20HL1Q3ZLR7 823 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 FNBP1LQ5T0N5 605 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 CIAPIN1Q6FI81 312 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 ABHD15Q6UXT9 468 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TRIM72Q6ZMU5 477 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 FBXO36Q8NEA4 188 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 TTC17Q96AE7 1141 aa15.36■□□□□ 0.05
SCARB2-221ENST00000640341 GRAP2O75791 330 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 TBXAS1P24557 533 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-221ENST00000640341 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
SCARB2-221ENST00000640341 PTP4A2Q12974 167 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
SCARB2-221ENST00000640341 PHF13Q86YI8 300 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms