RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 KRT39Q6A163 491 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 FILIP1Q7Z7B0 1213 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 TAF4BQ92750 862 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 RTP3Q9BQQ7 232 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 ACBD6Q9BR61 282 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 XYLT2Q9H1B5 865 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 SNX25Q9H3E2 840 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 VRTNQ9H8Y1 702 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 WDR6Q9NNW5 1121 aaKnown RBP16.97■□□□□ 0.31
SPIN3-233ENST00000640039 DACH1Q9UI36 760 aa16.97■□□□□ 0.31
SPIN3-233ENST00000640039 ARIH1Q9Y4X5 557 aaPredicted RBP16.97■□□□□ 0.31
SPIN3-233ENST00000640039 CLUHO75153 1309 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 SEC24AO95486 1093 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 HLA-DRAP01903 254 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 POU2F2P09086 479 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 MXI1P50539 228 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 PPP3CAQ08209 521 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 DUSP4Q13115 394 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 PLD1Q13393 1074 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 FRMD5Q7Z6J6 570 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 TDRD5Q8NAT2 981 aaKnown RBP16.96■□□□□ 0.31
SPIN3-233ENST00000640039 ATAD1Q8NBU5 361 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 FEZF2Q8TBJ5 459 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 C2orf15Q8WU43 125 aaKnown RBP16.96■□□□□ 0.31
SPIN3-233ENST00000640039 ACSF2Q96CM8 615 aaPredicted RBP16.96■□□□□ 0.31
SPIN3-233ENST00000640039 DUSP9Q99956 384 aaKnown RBP16.96■□□□□ 0.31
SPIN3-233ENST00000640039 RWDD2AQ9UIY3 292 aa16.96■□□□□ 0.31
SPIN3-233ENST00000640039 C19orf67A6NJJ6 358 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 GABRDO14764 452 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 TACC1O75410 805 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 GNA14O95837 355 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 FAM163BP0C2L3 166 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 WARSP23381 471 aaKnown RBP16.95■□□□□ 0.3
SPIN3-233ENST00000640039 ACAT1P24752 427 aaKnown RBP16.95■□□□□ 0.3
SPIN3-233ENST00000640039 ALDH1A3P47895 512 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 TWF1Q12792 350 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 NFE2Q16621 373 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-233ENST00000640039 TPD52L1Q16890 204 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-233ENST00000640039 INTS6LQ5JSJ4 861 aaKnown RBP16.95■□□□□ 0.3
SPIN3-233ENST00000640039 IQCEQ6IPM2 695 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 OTOP3Q7RTS5 596 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 LIMS2Q7Z4I7 341 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 GRASPQ7Z6J2 395 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-233ENST00000640039 OSTM1Q86WC4 334 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 OR6B3Q8NGW1 331 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 SPPL2BQ8TCT7 592 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 KBTBD7Q8WVZ9 684 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 FAM122AQ96E09 287 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 ABI2Q9NYB9 513 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-233ENST00000640039 HSFX1Q9UBD0 423 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 CDH9Q9ULB4 789 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 USTQ9Y2C2 406 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 YIPF1Q9Y548 306 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 DENND4AQ7Z401 1863 aa16.95■□□□□ 0.3
SPIN3-233ENST00000640039 LOC730098B7Z3J9 87 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 ASS1P00966 412 aaKnown RBP16.94■□□□□ 0.3
SPIN3-233ENST00000640039 GNL1P36915 607 aaPredicted RBP16.94■□□□□ 0.3
SPIN3-233ENST00000640039 TUFMP49411 452 aaKnown RBP16.94■□□□□ 0.3
SPIN3-233ENST00000640039 NLRP12P59046 1061 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 NOP14P78316 857 aaKnown RBP16.94■□□□□ 0.3
SPIN3-233ENST00000640039 MGAT5BQ3V5L5 792 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 SCARA5Q6ZMJ2 495 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 FBXL13Q8NEE6 735 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 TAS1R2Q8TE23 839 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 ZNF512Q96ME7 567 aaPredicted RBP16.94■□□□□ 0.3
SPIN3-233ENST00000640039 SEPT5Q99719 369 aaPredicted RBP16.94■□□□□ 0.3
SPIN3-233ENST00000640039 SYT15Q9BQS2 421 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
SPIN3-233ENST00000640039 SLC27A5Q9Y2P5 690 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 PCDHB5Q9Y5E4 795 aa16.94■□□□□ 0.3
SPIN3-233ENST00000640039 VNN2O95498 520 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 PDGFRBP09619 1106 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 PTPN2P17706 415 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 FSHRP23945 695 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 GBP2P32456 591 aaPredicted RBP16.93■□□□□ 0.3
SPIN3-233ENST00000640039 EPHB3P54753 998 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 MCCD1P59942 119 aaPredicted RBP16.93■□□□□ 0.3
SPIN3-233ENST00000640039 MAPRE1Q15691 268 aaKnown RBP16.93■□□□□ 0.3
SPIN3-233ENST00000640039 DPCR1Q3MIW9 517 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 PABPC1LQ4VXU2 614 aaKnown RBP16.93■□□□□ 0.3
SPIN3-233ENST00000640039 CCDC183Q5T5S1 534 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 GET4Q7L5D6 327 aaPredicted RBP16.93■□□□□ 0.3
SPIN3-233ENST00000640039 LRRTM3Q86VH5 581 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 PLCD3Q8N3E9 789 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 CORO1BQ9BR76 489 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 MRPL45Q9BRJ2 306 aaKnown RBP16.93■□□□□ 0.3
SPIN3-233ENST00000640039 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 SMYD3Q9H7B4 428 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.93■□□□□ 0.31e-18■■■■■ 447.2
SPIN3-233ENST00000640039 HCFC1R1Q9NWW0 138 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 GTF3C4Q9UKN8 822 aa16.93■□□□□ 0.3
SPIN3-233ENST00000640039 MUC6Q6W4X9 2439 aa16.92■□□□□ 0.3
SPIN3-233ENST00000640039 A8MXQ7 604 aa16.92■□□□□ 0.3
SPIN3-233ENST00000640039 C2CD4DB7Z1M9 353 aa16.92■□□□□ 0.3
SPIN3-233ENST00000640039 N4BP1O75113 896 aaKnown RBP16.92■□□□□ 0.3
SPIN3-233ENST00000640039 RHOP08100 348 aa16.92■□□□□ 0.3
SPIN3-233ENST00000640039 TRIM21P19474 475 aaKnown RBP16.92■□□□□ 0.3
SPIN3-233ENST00000640039 LMO2P25791 158 aa16.92■□□□□ 0.3
SPIN3-233ENST00000640039 CDR1P51861 262 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms