RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 NAP1L1P55209 391 aaKnown RBP11.92□□□□□ -0.5
LINC02001-202ENST00000638682 HACE1Q8IYU2 909 aa11.92□□□□□ -0.5
LINC02001-202ENST00000638682 TRIM58Q8NG06 486 aa11.92□□□□□ -0.5
LINC02001-202ENST00000638682 C18orf25Q96B23 403 aaPredicted RBP11.92□□□□□ -0.5
LINC02001-202ENST00000638682 ALS2CR12Q96Q35 445 aa11.92□□□□□ -0.5
LINC02001-202ENST00000638682 TSPAN18Q96SJ8 248 aa11.92□□□□□ -0.5
LINC02001-202ENST00000638682 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
LINC02001-202ENST00000638682 FAM105AQ9NUU6 356 aa11.92□□□□□ -0.5
LINC02001-202ENST00000638682 RNF19AQ9NV58 838 aa11.92□□□□□ -0.5
LINC02001-202ENST00000638682 CXXC1Q9P0U4 656 aaPredicted RBP11.92□□□□□ -0.5
LINC02001-202ENST00000638682 UBQLN1Q9UMX0 589 aaKnown RBP11.92□□□□□ -0.5
LINC02001-202ENST00000638682 NCANO14594 1321 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 FAM170AA1A519 330 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 XPOTO43592 962 aaKnown RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 TMEM253P0C7T8 217 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 GZMAP12544 262 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 ITGA4P13612 1032 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 ABCB4P21439 1286 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 DNAJB2P25686 324 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 SMAD3P84022 425 aaKnown RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 MYO1EQ12965 1108 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 MBTPS1Q14703 1052 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 RASIP1Q5U651 963 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 BLOC1S3Q6QNY0 202 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 USP38Q8NB14 1042 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 MYRIPQ8NFW9 859 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 CTNNBL1Q8WYA6 563 aaPredicted RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 VWCEQ96DN2 955 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 SDCBP2Q9H190 292 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 ISCUQ9H1K1 167 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 PDCL3Q9H2J4 239 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 L2HGDHQ9H9P8 463 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 CYP3A43Q9HB55 503 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 SLC24A3Q9HC58 644 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 PUF60Q9UHX1 559 aaKnown RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 SLC4A7Q9Y6M7 1214 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 SQORQ9Y6N5 450 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 A0A0A6YYK5 440 aaPredicted RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 ANKRD62A6NC57 917 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 THAP12O43422 761 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 MGEA5O60502 916 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 BAIAP3O94812 1187 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 CXCL10P02778 98 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 FTLP02792 175 aaPredicted RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 NOP2P46087 812 aaKnown RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 TERF1P54274 439 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 CDH8P55286 799 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 TNNC1P63316 161 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 DSC3Q14574 896 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 IFI16Q16666 785 aaKnown RBP11.91□□□□□ -0.5
LINC02001-202ENST00000638682 CLEC16AQ2KHT3 1053 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 C9orf57Q5W0N0 161 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 TRIM72Q6ZMU5 477 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 LRRC52Q8N7C0 313 aa11.91□□□□□ -0.5
LINC02001-202ENST00000638682 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.9□□□□□ -0.5
LINC02001-202ENST00000638682 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.9□□□□□ -0.5
LINC02001-202ENST00000638682 ANO9A1A5B4 782 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 ENC1O14682 589 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 PPEF2O14830 753 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 ATP1A1P05023 1023 aaKnown RBP11.9□□□□□ -0.5
LINC02001-202ENST00000638682 RAB27AP51159 221 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 GPNMBQ14956 572 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 ZNF394Q53GI3 561 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 FAM109BQ6ICB4 259 aaPredicted RBP11.9□□□□□ -0.5
LINC02001-202ENST00000638682 ACAD10Q6JQN1 1059 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 MRPL10Q7Z7H8 261 aaKnown RBP11.9□□□□□ -0.5
LINC02001-202ENST00000638682 RFFLQ8WZ73 363 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 SEPT8Q92599 483 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 LPPQ93052 612 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 ARHGEF26Q96DR7 871 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 THAP2Q9H0W7 228 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 MRFAP1Q9Y605 127 aa11.9□□□□□ -0.5
LINC02001-202ENST00000638682 GRID2IPA4D2P6 1211 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 MEIS3P2A8K0S8 358 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 PTGESO14684 152 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 EFCAB14O75071 495 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 PALMO75781 387 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
LINC02001-202ENST00000638682 UNGP13051 313 aaPredicted RBP11.89□□□□□ -0.51
LINC02001-202ENST00000638682 ATP2A2P16615 1042 aaKnown RBP11.89□□□□□ -0.51
LINC02001-202ENST00000638682 ATF7P17544 494 aaPredicted RBP11.89□□□□□ -0.51
LINC02001-202ENST00000638682 CYP3A5P20815 502 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
LINC02001-202ENST00000638682 SSTR3P32745 418 aaPredicted RBP11.89□□□□□ -0.51
LINC02001-202ENST00000638682 GPC5P78333 572 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 TUBB2AQ13885 445 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 NAA35Q5VZE5 725 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 PASD1Q8IV76 773 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 TTC39CQ8N584 583 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 ZNF606Q8WXB4 792 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 ZNF560Q96MR9 790 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
LINC02001-202ENST00000638682 RPS6KC1Q96S38 1066 aa11.89□□□□□ -0.51
LINC02001-202ENST00000638682 MMS19Q96T76 1030 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms