RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 GDF9O60383 454 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 KRT37O76014 449 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 HAPLN1P10915 354 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 PLCG1P19174 1290 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 CDC25CP30307 473 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 UBA7P41226 1012 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 MCM2P49736 904 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 VEPH1Q14D04 833 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 ITPRIPL2Q3MIP1 535 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 FAM160A2Q8N612 972 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 GIPC2Q8TF65 315 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 RAD54LQ92698 747 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 TMX3Q96JJ7 454 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 CCSER1Q9C0I3 900 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 ST6GALNAC4Q9H4F1 302 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 DSEQ9UL01 958 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 GJB2P29033 226 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 ADSSP30520 456 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 POU5F1Q01860 360 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 PPM1JQ5JR12 505 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 ADALQ6DHV7 355 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 EFCAB13Q8IY85 973 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 CMTM8Q8IZV2 173 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 C2orf15Q8WU43 125 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 CALML4Q96GE6 196 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 PYM1Q9BRP8 204 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 GKN1Q9NS71 199 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 TMLHEQ9NVH6 421 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 DPP3Q9NY33 737 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 CCL26Q9Y258 94 aa13.11□□□□□ -0.31
CACNA1A-250ENST00000637809 H3BQV1 296 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 TBCAO75347 108 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 PPP1R37O75864 691 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 F11P03951 625 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 ABCD1P33897 745 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 LONP1P36776 959 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 TAF6P49848 677 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 WNT7BP56706 349 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 NLRP12P59046 1061 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 RABEP1Q15276 862 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 TMEM196Q5HYL7 178 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 FSTL4Q6MZW2 842 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 METTL23Q86XA0 190 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 THEM5Q8N1Q8 247 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 SPPL2BQ8TCT7 592 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 GCNAQ96QF7 691 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 ZHX3Q9H4I2 956 aa13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 THG1LQ9NWX6 298 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 ABI2Q9NYB9 513 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-250ENST00000637809 FRYQ5TBA9 3013 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 CCDC163A0A0D9SF12 145 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 KPNA7A9QM74 516 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 TRDMT1O14717 391 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 RAP1GAPP47736 663 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 PXNP49023 591 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 GPR15P49685 360 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 RUNX3Q13761 415 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 SCARA3Q6AZY7 606 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 SLFN12LQ6IEE8 588 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 CEP68Q76N32 757 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 ZNF720Q7Z2F6 126 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 GAB3Q8WWW8 586 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 LARP4BQ92615 738 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 POLR3BQ9NW08 1133 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 ZMYM5Q9UJ78 669 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 TSC2P49815 1807 aa13.09□□□□□ -0.31
CACNA1A-250ENST00000637809 FOXD2O60548 495 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 TADA3O75528 432 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 ARSAP15289 507 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 DDIT3P35638 169 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 AVPR1AP37288 418 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 LIMK1P53667 647 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 KCNA1Q09470 495 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 SF3A2Q15428 464 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 SV2CQ496J9 727 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 NAIF1Q69YI7 327 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 TXNDC8Q6A555 127 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms