RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 DSC1Q08554 894 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 CLLU1OSQ5K130 101 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 NAA35Q5VZE5 725 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 CNKSR3Q6P9H4 555 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 SYCE1Q8N0S2 351 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 KBTBD7Q8WVZ9 684 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 ZNF653Q96CK0 615 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 TWNKQ96RR1 684 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 MRPL45Q9BRJ2 306 aaKnown RBP16.31■□□□□ 0.2
CLN6-219ENST00000637329 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 L2HGDHQ9H9P8 463 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 RNF19AQ9NV58 838 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 MIOSQ9NXC5 875 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 L1RE1Q9UN81 338 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLN6-219ENST00000637329 INPP5FQ9Y2H2 1132 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 LTBP2Q14767 1821 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 O00370 1275 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 ENPP3O14638 875 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 BUB1O43683 1085 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 POMCP01189 267 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 CALB1P05937 261 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 AFF1P51825 1210 aaKnown RBP16.3■□□□□ 0.2
CLN6-219ENST00000637329 NAP1L1P55209 391 aaKnown RBP16.3■□□□□ 0.2
CLN6-219ENST00000637329 CNGA2Q16280 664 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 LRRC26Q2I0M4 334 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 LIN9Q5TKA1 542 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 C11orf63Q6NUN7 778 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 UBE2Q1Q7Z7E8 422 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 NPAS4Q8IUM7 802 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLN6-219ENST00000637329 MCOLN2Q8IZK6 566 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 ARHGEF26Q96DR7 871 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 CYFIP2Q96F07 1278 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 SCLYQ96I15 445 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 TNIP3Q96KP6 325 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 MRPL9Q9BYD2 267 aaKnown RBP16.3■□□□□ 0.2
CLN6-219ENST00000637329 SNX25Q9H3E2 840 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 PCDHB7Q9Y5E2 793 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 SCINQ9Y6U3 715 aa16.3■□□□□ 0.2
CLN6-219ENST00000637329 UNC80Q8N2C7 3258 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 GRID2IPA4D2P6 1211 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 CASTOR2A6NHX0 329 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 A8MXQ7 604 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 CALCAP01258 141 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 PFKMP08237 780 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 ODC1P11926 461 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 MMP8P22894 467 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 CYP2C18P33260 490 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 BMP8BP34820 402 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 CCL23P55773 120 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
CLN6-219ENST00000637329 PAPD7Q5XG87 772 aaKnown RBP16.29■□□□□ 0.2
CLN6-219ENST00000637329 ARHGAP17Q68EM7 881 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 LCLAT1Q6UWP7 414 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 PASD1Q8IV76 773 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 CRYBG2Q8N1P7 616 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 LRRC57Q8N9N7 239 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 OR6B3Q8NGW1 331 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 TPCN2Q8NHX9 752 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 SLC35G2Q8TBE7 412 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 SENP8Q96LD8 212 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 CTTNBP2NLQ9P2B4 639 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 LCMT1Q9UIC8 334 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 DSEQ9UL01 958 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 LRFN2Q9ULH4 789 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 STRIP2Q9ULQ0 834 aa16.29■□□□□ 0.2
CLN6-219ENST00000637329 MICAL3Q7RTP6 2002 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 CYB561D2O14569 222 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 GABRDO14764 452 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 EFCAB14O75071 495 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 PALMO75781 387 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 CYP11A1P05108 521 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 SETSIPP0DME0 302 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 NOP2P46087 812 aaKnown RBP16.28■□□□□ 0.2
CLN6-219ENST00000637329 LHX1P48742 406 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 AMPD2Q01433 879 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 DCLRE1AQ6PJP8 1040 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 SLFN11Q7Z7L1 901 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 C1orf131Q8NDD1 294 aaKnown RBP16.28■□□□□ 0.2
CLN6-219ENST00000637329 C3orf58Q8NDZ4 430 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 CPA5Q8WXQ8 436 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 HEXIM2Q96MH2 286 aaKnown RBP16.28■□□□□ 0.2
CLN6-219ENST00000637329 MIS12Q9H081 205 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 TBC1D13Q9NVG8 400 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 ADAM22Q9P0K1 906 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 CNOT8Q9UFF9 292 aaKnown RBP16.28■□□□□ 0.2
CLN6-219ENST00000637329 MRFAP1Q9Y605 127 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 SCN5AQ14524 2016 aa16.28■□□□□ 0.2
CLN6-219ENST00000637329 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.27■□□□□ 0.2
CLN6-219ENST00000637329 M0QYV0 167 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 M0QZQ0 153 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms