RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 CBWD5Q5RIA9 395 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 PPM1LQ5SGD2 360 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 TRIM59Q8IWR1 403 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 ATAD1Q8NBU5 361 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 FBXL13Q8NEE6 735 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 ADAMTS19Q8TE59 1207 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 SEMA4DQ92854 862 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 NECTIN4Q96NY8 510 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 PGLYRP2Q96PD5 576 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 PKMYT1Q99640 499 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 PI4K2AQ9BTU6 479 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 CRISPLD1Q9H336 500 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 CYP4F11Q9HBI6 524 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 HSFX1Q9UBD0 423 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 PRKAG3Q9UGI9 489 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 NME7Q9Y5B8 376 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 C2orf16Q68DN1 1984 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 MTMR11A4FU01 709 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 PMM2O15305 246 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 HCRTO43612 131 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 ATP2C2O75185 946 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 CCDC192P0DO97 292 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 ACAT1P24752 427 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 PCSK1P29120 753 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 GNL1P36915 607 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 ASPAP45381 313 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 FMO5P49326 533 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 CDH8P55286 799 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 TSPY1Q01534 308 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 DUSP4Q13115 394 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 KLHL40Q2TBA0 621 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SLC39A12Q504Y0 691 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 INTS6LQ5JSJ4 861 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SPOPLQ6IQ16 392 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 CAVIN1Q6NZI2 390 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 FAM171BQ6P995 826 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SASS6Q6UVJ0 657 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 ADHFE1Q8IWW8 467 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 DCP1BQ8IZD4 617 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SMG7Q92540 1137 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 PHF7Q9BWX1 381 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 BCO2Q9BYV7 579 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SDCBP2Q9H190 292 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 POMKQ9H5K3 350 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SMYD3Q9H7B4 428 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 APOBEC3GQ9HC16 384 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 WDR6Q9NNW5 1121 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 TMLHEQ9NVH6 421 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 RAB20Q9NX57 234 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 CDH9Q9ULB4 789 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 INSL5Q9Y5Q6 135 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 DOCK6Q96HP0 2047 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 NCOR1O75376 2440 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 TTC28Q96AY4 2481 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 MYBPHLA2RUH7 354 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 C19orf67A6NJJ6 358 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 CCL16O15467 120 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 XYLBO75191 536 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 PDGFRBP09619 1106 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 P4HA1P13674 534 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 CDR1P51861 262 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 NOP14P78316 857 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 ZP2Q05996 745 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 KCNH2Q12809 1159 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 NFE2Q16621 373 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 TTC9BQ8N6N2 239 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 OR6B3Q8NGW1 331 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 C2orf15Q8WU43 125 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 FAXDC2Q96IV6 333 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 CNOT6LQ96LI5 555 aaKnown RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 NECAB3Q96P71 396 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SYT15Q9BQS2 421 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 IMPG2Q9BZV3 1241 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SNX25Q9H3E2 840 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 THAP9Q9H5L6 903 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 PIDD1Q9HB75 910 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC00339-210ENST00000635675 ANO10Q9NW15 660 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 GTF3C4Q9UKN8 822 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 SLC27A5Q9Y2P5 690 aa10.41□□□□□ -0.74
LINC00339-210ENST00000635675 C5orf42Q9H799 3197 aa10.4□□□□□ -0.74
LINC00339-210ENST00000635675 LOC730098B7Z3J9 87 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 P4HA2O15460 535 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 LRG1P02750 347 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 HAPLN1P10915 354 aaPredicted RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 RAP1GAPP47736 663 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 TUFMP49411 452 aaKnown RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 TWF1Q12792 350 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 STX1AQ16623 288 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 TPD52L1Q16890 204 aaPredicted RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 CCDC142Q17RM4 750 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 SKOR2Q2VWA4 1001 aaPredicted RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 SCARA5Q6ZMJ2 495 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 C11orf57Q6ZUT1 292 aaPredicted RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 GRASPQ7Z6J2 395 aaPredicted RBP10.4□□□□□ -0.75
LINC00339-210ENST00000635675 CCDC150Q8NCX0 1101 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 LMO3Q8TAP4 145 aa10.4□□□□□ -0.75
LINC00339-210ENST00000635675 MYCBPAPQ8TBZ2 947 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms