RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PLXNA3P51805 1871 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 CLIC2O15247 247 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
SSBP4-215ENST00000625926 DCNP07585 359 aaKnown RBP11.65□□□□□ -0.54
SSBP4-215ENST00000625926 HAPLN1P10915 354 aaPredicted RBP11.65□□□□□ -0.54
SSBP4-215ENST00000625926 PSMC3P17980 439 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 VIPR2P41587 438 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 LHX1P48742 406 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 CDR1P51861 262 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 MYL7Q01449 175 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 PSMD2Q13200 908 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 GRM2Q14416 872 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 ANGPT1Q15389 498 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 KNOP1Q1ED39 458 aaKnown RBP11.65□□□□□ -0.54
SSBP4-215ENST00000625926 SCARA3Q6AZY7 606 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 DPH6Q7L8W6 267 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 GRAMD1CQ8IYS0 662 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 PJA1Q8NG27 643 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 OR5B17Q8NGF7 314 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 SPATA18Q8TC71 538 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 DEPDC1BQ8WUY9 529 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 DNASE1L2Q92874 299 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 IRF7Q92985 503 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 FAM84AQ96KN4 292 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 FNBP1Q96RU3 617 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 NELL2Q99435 816 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 FOXQ1Q9C009 403 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 BRD9Q9H8M2 597 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 DDX43Q9NXZ2 648 aaKnown RBP11.65□□□□□ -0.54
SSBP4-215ENST00000625926 ABI2Q9NYB9 513 aaPredicted RBP11.65□□□□□ -0.54
SSBP4-215ENST00000625926 SIX4Q9UIU6 781 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 L1RE1Q9UN81 338 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 PCDHB5Q9Y5E4 795 aa11.65□□□□□ -0.54
SSBP4-215ENST00000625926 A0A1B0GVL5 298 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 FAM170BA6NMN3 283 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 ACTN4O43707 911 aaKnown RBP11.64□□□□□ -0.55
SSBP4-215ENST00000625926 MYL1P05976 194 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 DLATP10515 647 aaKnown RBP11.64□□□□□ -0.55
SSBP4-215ENST00000625926 PFKFB1P16118 471 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 ATF6P18850 670 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 TNNI1P19237 187 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 GABRR2P28476 465 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 GDI1P31150 447 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 NBL1P41271 181 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 CYP2J2P51589 502 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 UBXN2BQ14CS0 331 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 SOWAHAQ2M3V2 549 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 ARHGAP15Q53QZ3 475 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 VITQ6UXI7 678 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 ZNF852Q6ZMS4 543 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 GAREM2Q75VX8 874 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 TRAPPC11Q7Z392 1133 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 MFSD6LQ8IWD5 586 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 C12orf56Q8IXR9 622 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 ADGRF2Q8IZF7 708 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 GOLGA5Q8TBA6 731 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 GIPC2Q8TF65 315 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 CCDC127Q96BQ5 260 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 LPIN3Q9BQK8 851 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 BCO2Q9BYV7 579 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 SCAND2PQ9GZW5 306 aaPredicted RBP11.64□□□□□ -0.55
SSBP4-215ENST00000625926 ZNF334Q9HCZ1 680 aaPredicted RBP11.64□□□□□ -0.55
SSBP4-215ENST00000625926 TRPV5Q9NQA5 729 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 HEBP1Q9NRV9 189 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 EXOC1Q9NV70 894 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 TMLHEQ9NVH6 421 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 DLGAP2Q9P1A6 1054 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 HPSEQ9Y251 543 aa11.64□□□□□ -0.55
SSBP4-215ENST00000625926 MRPS17Q9Y2R5 130 aaKnown RBP11.64□□□□□ -0.55
SSBP4-215ENST00000625926 DENND4AQ7Z401 1863 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 PTPRJQ12913 1337 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 HEPACAM2A8MVW5 462 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 PROB1E7EW31 1015 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 GABRDO14764 452 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 ZNF263O14978 683 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 NCAM2O15394 837 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 KLRC4O43908 158 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 EXOC3O60645 756 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 CD72P21854 359 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 ACAT1P24752 427 aaKnown RBP11.63□□□□□ -0.55
SSBP4-215ENST00000625926 PCSK1P29120 753 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 CDC25CP30307 473 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 RPL10AP62906 217 aaKnown RBP11.63□□□□□ -0.55
SSBP4-215ENST00000625926 CYP24A1Q07973 514 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 STK4Q13043 487 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 PSMD6Q15008 389 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 INTS6LQ5JSJ4 861 aaKnown RBP11.63□□□□□ -0.55
SSBP4-215ENST00000625926 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 TPRG1Q6ZUI0 275 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 ARID3BQ8IVW6 561 aaPredicted RBP11.63□□□□□ -0.55
SSBP4-215ENST00000625926 YAF2Q8IY57 180 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 CHAMP1Q96JM3 812 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 GCNAQ96QF7 691 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 CGRRF1Q99675 332 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 PI4K2AQ9BTU6 479 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 TASP1Q9H6P5 420 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms