RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 FAM3CQ92520 227 aa20.68■□□□□ 0.9
ATG4B-226ENST00000625810 LPIN3Q9BQK8 851 aa20.68■□□□□ 0.9
ATG4B-226ENST00000625810 CBWD1Q9BRT8 395 aa20.68■□□□□ 0.9
ATG4B-226ENST00000625810 FGFBP2Q9BYJ0 223 aa20.68■□□□□ 0.9
ATG4B-226ENST00000625810 PRMT8Q9NR22 394 aaPredicted RBP20.68■□□□□ 0.9
ATG4B-226ENST00000625810 ABI2Q9NYB9 513 aaPredicted RBP20.68■□□□□ 0.9
ATG4B-226ENST00000625810 PIAS3Q9Y6X2 628 aa20.68■□□□□ 0.9
ATG4B-226ENST00000625810 F5P12259 2224 aa20.68■□□□□ 0.9
ATG4B-226ENST00000625810 TICRRQ7Z2Z1 1910 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 PPP6R2O75170 966 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 ITGB3P05106 788 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 WNT7BP56706 349 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 AMPD3Q01432 767 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 TSPY1Q01534 308 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 STXBP5Q5T5C0 1151 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 FOXD4L5Q5VV16 416 aaPredicted RBP20.67■□□□□ 0.9
ATG4B-226ENST00000625810 GAREM2Q75VX8 874 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 LRRTM3Q86VH5 581 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 KIAA2013Q8IYS2 634 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 CSGALNACT2Q8N6G5 542 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 GIPC2Q8TF65 315 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 FOXD4L4Q8WXT5 416 aaPredicted RBP20.67■□□□□ 0.9
ATG4B-226ENST00000625810 RUBCNQ92622 972 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 NELL1Q92832 810 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 RSPRY1Q96DX4 576 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 GCNAQ96QF7 691 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 HINFPQ9BQA5 517 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 TNMDQ9H2S6 317 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 R3HCC1Q9Y3T6 440 aaKnown RBP20.67■□□□□ 0.9
ATG4B-226ENST00000625810 PCDHGA2Q9Y5H1 932 aa20.67■□□□□ 0.9
ATG4B-226ENST00000625810 ARNTLO00327 626 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 HUS1O60921 280 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 HSP90AA1P07900 732 aaKnown RBP20.66■□□□□ 0.9
ATG4B-226ENST00000625810 KRT19P08727 400 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 TMEM191BP0C7N4 346 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 HAPLN1P10915 354 aaPredicted RBP20.66■□□□□ 0.9
ATG4B-226ENST00000625810 BFSP1Q12934 665 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 MTAPQ13126 283 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 TSSK4Q6SA08 328 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 ERMP1Q7Z2K6 904 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 GPD1LQ8N335 351 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 DCLK2Q8N568 766 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 C1orf127Q8N9H9 656 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 ZBTB44Q8NCP5 570 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 DHX58Q96C10 678 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 CUEDC2Q9H467 287 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 PDE11AQ9HCR9 933 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 PCDHB5Q9Y5E4 795 aa20.66■□□□□ 0.9
ATG4B-226ENST00000625810 CEP250Q9BV73 2442 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 KIAA0391O15091 583 aaKnown RBP20.65■□□□□ 0.9
ATG4B-226ENST00000625810 CHADO15335 359 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 ATF6P18850 670 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 CDC25CP30307 473 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 IQUBQ8NA54 791 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 SNX21Q969T3 373 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 MKNK1Q9BUB5 465 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 CHRDQ9H2X0 955 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 TASP1Q9H6P5 420 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 ZSCAN32Q9NX65 697 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 ITGA11Q9UKX5 1188 aa20.65■□□□□ 0.9
ATG4B-226ENST00000625810 CUTAO60888 179 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 LILRB5O75023 590 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 PRPF40AO75400 957 aaKnown RBP20.64■□□□□ 0.89
ATG4B-226ENST00000625810 YEATS4O95619 227 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 CCNE1P24864 410 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 KPNA1P52294 538 aaPredicted RBP20.64■□□□□ 0.89
ATG4B-226ENST00000625810 ASIC1P78348 528 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 RBP5P82980 135 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 CYP4F8P98187 520 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 MYL7Q01449 175 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 NFE2Q16621 373 aaPredicted RBP20.64■□□□□ 0.89
ATG4B-226ENST00000625810 FOXD4L6Q3SYB3 417 aaPredicted RBP20.64■□□□□ 0.89
ATG4B-226ENST00000625810 FOXD4L3Q6VB84 417 aaPredicted RBP20.64■□□□□ 0.89
ATG4B-226ENST00000625810 HSCBQ8IWL3 235 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 PDCL2Q8N4E4 241 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 LRRC52Q8N7C0 313 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 ATRIPQ8WXE1 791 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 HPS3Q969F9 1004 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 RMDN1Q96DB5 314 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 ANKRD36BP1Q96IX9 119 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 TRIM9Q9C026 710 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 LMAN1LQ9HAT1 526 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 KBTBD4Q9NVX7 518 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 DDX43Q9NXZ2 648 aaKnown RBP20.64■□□□□ 0.89
ATG4B-226ENST00000625810 L1RE1Q9UN81 338 aa20.64■□□□□ 0.89
ATG4B-226ENST00000625810 ZNF233A6NK53 670 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 TDGF1P13385 188 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 FCHO2Q0JRZ9 810 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 E2F4Q16254 413 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 ARHGAP29Q52LW3 1261 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 TMEM86AQ8N2M4 240 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 FAM84AQ96KN4 292 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 PI4K2AQ9BTU6 479 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 MTMR12Q9C0I1 747 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 C8orf33Q9H7E9 229 aaPredicted RBP20.63■□□□□ 0.89
ATG4B-226ENST00000625810 TMLHEQ9NVH6 421 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 OBP2AQ9NY56 170 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 SNX9Q9Y5X1 595 aa20.63■□□□□ 0.89
ATG4B-226ENST00000625810 TNNC2P02585 160 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 PDIA4P13667 645 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms