RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 SLC2A13Q96QE2 648 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 NDC1Q9BTX1 674 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 VPS11Q9H270 941 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 TAF1DQ9H5J8 278 aaPredicted RBP4.04□□□□□ -1.76
CDKL5-208ENST00000624953 HOMER2Q9NSB8 354 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 SERPINB13Q9UIV8 391 aa4.04□□□□□ -1.76
CDKL5-208ENST00000624953 WDR33Q9C0J8 1336 aaKnown RBP4.03□□□□□ -1.76
CDKL5-208ENST00000624953 DUOX1Q9NRD9 1551 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 ZSWIM8A7E2V4 1837 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 ECM29Q5VYK3 1845 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 KLHL33A6NCF5 533 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 DIRC3C9JPN6 131 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 ABLIM3O94929 683 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 C6P13671 934 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 FPR1P21462 350 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 CCT2P78371 535 aaKnown RBP4.03□□□□□ -1.76
CDKL5-208ENST00000624953 DSC2Q02487 901 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 TARDBPQ13148 414 aaKnown RBP eCLIP4.03□□□□□ -1.76
CDKL5-208ENST00000624953 TBC1D9BQ66K14 1250 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 C2CD5Q86YS7 1000 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 PLXDC1Q8IUK5 500 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 PRR18Q8N4B5 295 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 DCBLD1Q8N8Z6 715 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 IFI44Q8TCB0 444 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 NSUN6Q8TEA1 469 aaKnown RBP4.03□□□□□ -1.76
CDKL5-208ENST00000624953 NRG4Q8WWG1 115 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 SORCS2Q96PQ0 1159 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 CDC5LQ99459 802 aaKnown RBP4.03□□□□□ -1.76
CDKL5-208ENST00000624953 CPPED1Q9BRF8 314 aaPredicted RBP4.03□□□□□ -1.76
CDKL5-208ENST00000624953 SLC46A2Q9BY10 475 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 LANCL2Q9NS86 450 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 MKS1Q9NXB0 559 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 SRRDQ9UH36 339 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 NARFQ9UHQ1 456 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 LIMCH1Q9UPQ0 1083 aa4.03□□□□□ -1.76
CDKL5-208ENST00000624953 RNF123Q5XPI4 1314 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 RANBP2P49792 3224 aaKnown RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 ALPK3Q96L96 1907 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 TMEM200CA6NKL6 621 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 LEFTY2O00292 366 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 PPM1GO15355 546 aaPredicted RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 AMHP03971 560 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 PDGFRBP09619 1106 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 SNRPA1P09661 255 aaKnown RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 MYBL2P10244 700 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 GSPT1P15170 499 aaKnown RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 KRT4P19013 534 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 HMGB2P26583 209 aaKnown RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 ADSLP30566 484 aaPredicted RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 CLRN1P58418 232 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 MCL1Q07820 350 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 SLC39A6Q13433 755 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 C3orf36Q3SXR2 165 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 NRN1LQ496H8 165 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 AGAP9Q5VTM2 703 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 CST9Q5W186 159 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 AFMIDQ63HM1 303 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 PRR5LQ6MZQ0 368 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF530Q6P9A1 599 aaPredicted RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 MRGPREQ86SM8 312 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 XYLT1Q86Y38 959 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 PQLC1Q8N2U9 271 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 MB21D1Q8N884 522 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 CHMP4CQ96CF2 233 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 MTMR8Q96EF0 704 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 ADI1Q9BV57 179 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 PCED1AQ9H1Q7 454 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 PARPBPQ9NWS1 579 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 DDX56Q9NY93 547 aaKnown RBP4.02□□□□□ -1.77
CDKL5-208ENST00000624953 NCDNQ9UBB6 729 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 OTOFQ9HC10 1997 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 A0A1B0GUL6 1792 aa4.02□□□□□ -1.77
CDKL5-208ENST00000624953 KIAA0100Q14667 2235 aaKnown RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 COL3A1P02461 1466 aaPredicted RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 GAGE12BA1L429 117 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 GAGE12HA6NDE8 117 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 DRGXA6NNA5 263 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 SRGNP10124 158 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 HK1P19367 917 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 SLC6A4P31645 630 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 RECQLP46063 649 aaPredicted RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 ALDH1A3P47895 512 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 NEK2P51955 445 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 HMGA2P52926 109 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 EIF5P55010 431 aaKnown RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 FAM189BP81408 668 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 CDC42EP1Q00587 391 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 ITKQ08881 620 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 SCAPQ12770 1279 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 TUBA3CQ13748 450 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 DEFB115Q30KQ5 88 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 BEAN1Q3B7T3 259 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 PGM2L1Q6PCE3 622 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 TUBA3EQ6PEY2 450 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 FAM180AQ6UWF9 173 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 RHOT2Q8IXI1 618 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 AMOTL1Q8IY63 956 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 DRC7Q8IY82 874 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 GSPT2Q8IYD1 628 aaKnown RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 CNTROBQ8N137 903 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms