RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 FAM102AQ5T9C2 384 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-213ENST00000622183 RRAGBQ5VZM2 374 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-213ENST00000622183 CIR1Q86X95 450 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-213ENST00000622183 GSPT2Q8IYD1 628 aaKnown RBP5.86□□□□□ -1.47
CPNE3-213ENST00000622183 CACNA2D3Q8IZS8 1091 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 MYCT1Q8N699 235 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 FEZF2Q8TBJ5 459 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 ZNF384Q8TF68 577 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 RAPGEF4Q8WZA2 1011 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 LRRC46Q96FV0 321 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 MARS2Q96GW9 593 aaKnown RBP5.86□□□□□ -1.47
CPNE3-213ENST00000622183 KCNC2Q96PR1 638 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 PPP1R9BQ96SB3 815 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 PNKPQ96T60 521 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 NEU1Q99519 415 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 SMOQ99835 787 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 HEPHQ9BQS7 1158 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 NECTIN3Q9NQS3 549 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 TBC1D23Q9NUY8 699 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 CAPN11Q9UMQ6 739 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 DGKBQ9Y6T7 804 aa5.86□□□□□ -1.47
CPNE3-213ENST00000622183 A0A087WZ62 844 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 FAM234BA2RU67 622 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 LEFTY2O00292 366 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 DCLK1O15075 740 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 GPR42O15529 346 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 CCP110O43303 1012 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 KCNQ3O43525 872 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 VPS4BO75351 444 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 ATXN1LP0C7T5 689 aaKnown RBP5.85□□□□□ -1.47
CPNE3-213ENST00000622183 BTF3P20290 206 aaKnown RBP5.85□□□□□ -1.47
CPNE3-213ENST00000622183 GABRB3P28472 473 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 TOB1P50616 345 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-213ENST00000622183 RENBPP51606 427 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 COPAP53621 1224 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 NHLH2Q02577 135 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 FSTL1Q12841 308 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 GRM1Q13255 1194 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 SLC29A2Q14542 456 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 NPY5RQ15761 445 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 PFKFB4Q16877 469 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 PLA1AQ53H76 456 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 ZFYVE27Q5T4F4 411 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 TSHZ3Q63HK5 1081 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 FCRL6Q6DN72 434 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 TAPT1Q6NXT6 567 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 GGT6Q6P531 493 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 FBXO38Q6PIJ6 1188 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 ZDHHC24Q6UX98 284 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 LDHAL6AQ6ZMR3 332 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 ZNF354CQ86Y25 554 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 OR56A1Q8NGH5 318 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 SLC46A1Q96NT5 459 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 TRIB1Q96RU8 372 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 RMDN3Q96TC7 470 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 MNTQ99583 582 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 RNPEPQ9H4A4 650 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 HEYLQ9NQ87 328 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-213ENST00000622183 ZSCAN32Q9NX65 697 aa5.85□□□□□ -1.47
CPNE3-213ENST00000622183 VSX1Q9NZR4 365 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-213ENST00000622183 CCDC195A0A1B0GUA6 201 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 CAPN14A8MX76 684 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 GOLGA6L6A8MZA4 724 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 PATE3B3GLJ2 98 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 RAB27BO00194 218 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 PODXLO00592 558 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 NPC1O15118 1278 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 NPHP1O15259 732 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 NDST3O95803 873 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 BMP7P18075 431 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 CCT5P48643 541 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 CPT1AP50416 773 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 FOXO1Q12778 655 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 BOP1Q14137 746 aaKnown RBP5.84□□□□□ -1.47
CPNE3-213ENST00000622183 ARHGEF7Q14155 803 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 RAB30Q15771 203 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 INSCQ1MX18 579 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 USP17L6PQ6QN14 398 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 SPOCD1Q6ZMY3 1216 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 SGMS1Q86VZ5 419 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 GLIS1Q8NBF1 620 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 CCDC150Q8NCX0 1101 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 PSD4Q8NDX1 1056 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 LTV1Q96GA3 475 aaPredicted RBP5.84□□□□□ -1.47
CPNE3-213ENST00000622183 SNX27Q96L92 541 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 MED15Q96RN5 788 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 GPR87Q9BY21 358 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 TMEM8AQ9HCN3 771 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 OBP2BQ9NPH6 170 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 RGL1Q9NZL6 768 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 HSFX1Q9UBD0 423 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 SHOC2Q9UQ13 582 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 TBC1D30Q9Y2I9 924 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 PCDHGB3Q9Y5G1 929 aa5.84□□□□□ -1.47
CPNE3-213ENST00000622183 A0A1B0GTW7 788 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 DBX1A6NMT0 343 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 DIRC3C9JPN6 131 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 SYT5O00445 386 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms