RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 IKZF4Q9H2S9 585 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 GIN1Q9NXP7 522 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 GRHL1Q9NZI5 618 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PPP1R1BQ9UD71 204 aaPredicted RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 ARMCX3Q9UH62 379 aaPredicted RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 FAM170AA1A519 330 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 DYTNA2CJ06 578 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 MEIS1O00470 390 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PODXLO00592 558 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SPAG7O75391 227 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 GH1P01241 217 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 ATP2B4P23634 1241 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 ANXA13P27216 316 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 HOXA7P31268 230 aaPredicted RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC5A2P31639 672 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 FOXN2P32314 431 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC18A1P54219 525 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC12A3P55017 1021 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 CSE1LP55060 971 aaKnown RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 NPEPPSP55786 919 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 GTF2IP78347 998 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 KCNH2Q12809 1159 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PDAP1Q13442 181 aaKnown RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 RRP1BQ14684 758 aaKnown RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 USP41Q3LFD5 358 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PEX26Q7Z412 305 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 IRF2BP2Q7Z5L9 587 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 MARVELD2Q8N4S9 558 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 OLIG1Q8TAK6 271 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 RPGRQ92834 1020 aaKnown RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 NSL1Q96IY1 281 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 NEURL2Q9BR09 285 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SENP6Q9GZR1 1112 aaPredicted RBP7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 CCDC68Q9H2F9 335 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 ZHX3Q9H4I2 956 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 ZNF696Q9H7X3 374 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PSTPIP2Q9H939 334 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 CYLDQ9NQC7 956 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 GID8Q9NWU2 228 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 HDAC9Q9UKV0 1011 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 PCDHA12Q9UN75 941 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 AK5Q9Y6K8 562 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 LY75O60449 1722 aa7.88□□□□□ -1.15
TRIM49B-202ENST00000622138 SOBPA7XYQ1 873 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ZBTB5O15062 677 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 MARCH6O60337 910 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 DNAJC6O75061 913 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 PGM3O95394 542 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 OCM2P0CE71 109 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 OCMP0CE72 109 aaPredicted RBP7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CDH3P22223 829 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 FGFR4P22455 802 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 NR2F2P24468 414 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 PHKA2P46019 1235 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 NUP107P57740 925 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SNAP25P60880 206 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SPIRE1Q08AE8 756 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SPCS2Q15005 226 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 QRICH1Q2TAL8 776 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CRY2Q49AN0 593 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 C6orf183Q5T699 404 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 TMEM214Q6NUQ4 689 aaKnown RBP7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CCDC62Q6P9F0 684 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 GJB7Q6PEY0 223 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 FAM196AQ6ZSG2 479 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 LRRC6Q86X45 466 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 RHOT2Q8IXI1 618 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 AHI1Q8N157 1196 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ANKRD35Q8N283 1001 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 TPCN2Q8NHX9 752 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ZFP28Q8NHY6 868 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 BORCS5Q969J3 196 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 HES6Q96HZ4 224 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CRAMP1Q96RY5 1269 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 TRIM55Q9BYV6 548 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 KLHL4Q9C0H6 718 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 DNAJC18Q9H819 358 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 C17orf75Q9HAS0 396 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 PALMDQ9NP74 551 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SIX2Q9NPC8 291 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 UBN1Q9NPG3 1134 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 NENFQ9UMX5 172 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SIPA1L1O43166 1804 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ZMYM2Q9UBW7 1377 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 KDM3AQ9Y4C1 1321 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 C10orf71Q711Q0 1435 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 FAM47DPA6NHR8 397 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 RSPH10B2B2RC85 870 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 RIMBP2O15034 1052 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 MSL3P1P0C860 447 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 RSPH10BP0C881 870 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 PCSK6P29122 969 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 EIF2B2P49770 351 aaKnown RBP7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 MXI1P50539 228 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SCNN1DP51172 638 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ACTR3P61158 418 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CREB5Q02930 508 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 APOFQ13790 326 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 MPP2Q14168 576 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms