RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 SLC46A2Q9BY10 475 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 ST6GALNAC4Q9H4F1 302 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 THG1LQ9NWX6 298 aaKnown RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 OBP2AQ9NY56 170 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 HSFX1Q9UBD0 423 aa10.06□□□□□ -0.8
TARDBP-227ENST00000622057 MAGED2Q9UNF1 606 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-227ENST00000622057 MYMKA6NI61 221 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 PRR5-ARHGAP8B1AHC4 643 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 IL18RAPO95256 599 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 GCNT3O95395 438 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 CENPBP07199 599 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-227ENST00000622057 IDEP14735 1019 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 TGM1P22735 817 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 ADSSP30520 456 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 CTHP32929 405 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 GPR15P49685 360 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 ARHGAP8P85298 464 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 TFAMQ00059 246 aaKnown RBP10.05□□□□□ -0.8
TARDBP-227ENST00000622057 SMARCB1Q12824 385 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 SRSF5Q13243 272 aaKnown RBP10.05□□□□□ -0.8
TARDBP-227ENST00000622057 PTPAQ15257 358 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 SV2CQ496J9 727 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 DGKKQ5KSL6 1271 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 SDHAF4Q5VUM1 108 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 FAM173BQ6P4H8 233 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 Q6ZS52 159 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 SYCP3Q8IZU3 236 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 MAB21L3Q8N8X9 362 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 STKLD1Q8NE28 680 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 ZSWIM2Q8NEG5 633 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 C2orf15Q8WU43 125 aaKnown RBP10.05□□□□□ -0.8
TARDBP-227ENST00000622057 SAAL1Q96ER3 474 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 ACCSQ96QU6 501 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 PI4K2AQ9BTU6 479 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 PCIF1Q9H4Z3 704 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 IL21Q9HBE4 155 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 PARD6AQ9NPB6 346 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 GKN1Q9NS71 199 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 TMLHEQ9NVH6 421 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
TARDBP-227ENST00000622057 AGAP1Q9UPQ3 857 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 PCDHB5Q9Y5E4 795 aa10.05□□□□□ -0.8
TARDBP-227ENST00000622057 SRPRBQ9Y5M8 271 aaKnown RBP10.05□□□□□ -0.8
TARDBP-227ENST00000622057 DNAH14Q0VDD8 3507 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 SPTBN4Q9H254 2564 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 DCDC2BA2VCK2 349 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 GOLGA8IPA6NC78 632 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 GOLGA8JA6NMD2 632 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 LDHAP00338 332 aaKnown RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 F11P03951 625 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 ITGB3P05106 788 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 RETP07949 1114 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 KRT19P08727 400 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 WEE1P30291 646 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 POLR2BP30876 1174 aaKnown RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 HOXC13P31276 330 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 AVPR1AP37288 418 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 TXLNAP40222 546 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 WNT7BP56706 349 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 TSPY1Q01534 308 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 POU5F1Q01860 360 aaKnown RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 LMNB2Q03252 620 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 BFSP1Q12934 665 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 DDR2Q16832 855 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 ITPRIPL2Q3MIP1 535 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 WDR44Q5JSH3 913 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 L1TD1Q5T7N2 865 aaKnown RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 TXNDC8Q6A555 127 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 TRIM68Q6AZZ1 485 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 LAIR1Q6GTX8 287 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 CEP68Q76N32 757 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 LONP2Q86WA8 852 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 CMTM8Q8IZV2 173 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 CSGALNACT2Q8N6G5 542 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 DNAJC19Q96DA6 116 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 ZNF560Q96MR9 790 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 C2orf42Q9NWW7 574 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 DDX43Q9NXZ2 648 aaKnown RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 SEL1LQ9UBV2 794 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 STK17AQ9UEE5 414 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 FBXO2Q9UK22 296 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.04□□□□□ -0.8
TARDBP-227ENST00000622057 MYH11P35749 1972 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
TARDBP-227ENST00000622057 K7ESF4 209 aa10.03□□□□□ -0.8
TARDBP-227ENST00000622057 HUS1O60921 280 aa10.03□□□□□ -0.8
TARDBP-227ENST00000622057 PPP1R37O75864 691 aa10.03□□□□□ -0.8
TARDBP-227ENST00000622057 PRPF6O94906 941 aaKnown RBP10.03□□□□□ -0.8
TARDBP-227ENST00000622057 CSH1P0DML2 217 aa10.03□□□□□ -0.8
TARDBP-227ENST00000622057 CSH2P0DML3 217 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms