RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 IL18RAPO95256 599 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 CCNE1P24864 410 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 VIPR2P41587 438 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 CASP5P51878 434 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 LINC00301Q8NCQ3 95 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 OR10T2Q8NGX3 314 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 CSGALNACT1Q8TDX6 532 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 DDX1Q92499 740 aaKnown RBP23.81■■□□□ 1.4
SRRT-218ENST00000620394 ACCSQ96QU6 501 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 DPP3Q9NY33 737 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 DSEQ9UL01 958 aa23.81■■□□□ 1.4
SRRT-218ENST00000620394 GCNT3O95395 438 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 MYL4P12829 197 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 TAF6P49848 677 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 DUSP4Q13115 394 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 GAS6Q14393 721 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 LONP2Q86WA8 852 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 BRSK2Q8IWQ3 736 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 YAF2Q8IY57 180 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 SHKBP1Q8TBC3 707 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 SNX21Q969T3 373 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 TMEM209Q96SK2 561 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 SLITRK6Q9H5Y7 841 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 FOXD4L1Q9NU39 408 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 TBC1D7Q9P0N9 293 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 PCDHB13Q9Y5F0 798 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 NCANO14594 1321 aa23.8■■□□□ 1.4
SRRT-218ENST00000620394 HEPACAM2A8MVW5 462 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 CHURC1-FNTBB4DL54 471 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 GARTP22102 1010 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 FNTBP49356 437 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 TEAD2Q15562 447 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 TTC9BQ8N6N2 239 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 ATAD1Q8NBU5 361 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 FGFBP2Q9BYJ0 223 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 ZCWPW1Q9H0M4 648 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 C8orf33Q9H7E9 229 aaPredicted RBP23.79■■□□□ 1.4
SRRT-218ENST00000620394 ASB3Q9Y575 518 aa23.79■■□□□ 1.4
SRRT-218ENST00000620394 ZFHX4Q86UP3 3567 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 CHADO15335 359 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 PPP6R2O75170 966 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 IDEP14735 1019 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 EPHB3P54753 998 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 WNT7BP56706 349 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 FCHO2Q0JRZ9 810 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 STK38Q15208 465 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 E2F4Q16254 413 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 ARMCX5Q6P1M9 558 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 TNMDQ9H2S6 317 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 DENND4CQ5VZ89 1909 aa23.78■■□□□ 1.4
SRRT-218ENST00000620394 KIF26AQ9ULI4 1882 aaPredicted RBP23.77■■□□□ 1.4
SRRT-218ENST00000620394 K7ESF4 209 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 HRO43593 1189 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 GJA1P17302 382 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 ALDH1A3P47895 512 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 DMWDQ09019 674 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 DGKKQ5KSL6 1271 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 ZSWIM2Q8NEG5 633 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 PSMG2Q969U7 264 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 CHAMP1Q96JM3 812 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 ZNF560Q96MR9 790 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 PYM1Q9BRP8 204 aaKnown RBP23.77■■□□□ 1.4
SRRT-218ENST00000620394 FAM213AQ9BRX8 229 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 PANK4Q9NVE7 773 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 KBTBD4Q9NVX7 518 aa23.77■■□□□ 1.4
SRRT-218ENST00000620394 SLC38A8A6NNN8 435 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 CYB561D2O14569 222 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 SPTLC2O15270 562 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 YEATS4O95619 227 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 LDHAP00338 332 aaKnown RBP23.76■■□□□ 1.39
SRRT-218ENST00000620394 PNPLA4P41247 253 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 KPNA1P52294 538 aaPredicted RBP23.76■■□□□ 1.39
SRRT-218ENST00000620394 SV2CQ496J9 727 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 PDILTQ8N807 584 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 FAM200AQ8TCP9 573 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 SAAL1Q96ER3 474 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 PANK2Q9BZ23 570 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 CUEDC2Q9H467 287 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 RBM12Q9NTZ6 932 aaKnown RBP23.76■■□□□ 1.39
SRRT-218ENST00000620394 OBSL1O75147 1896 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 CHD8Q9HCK8 2581 aa23.76■■□□□ 1.39
SRRT-218ENST00000620394 USP24Q9UPU5 2620 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 A0A1W2PRU2 124 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 KPNA7A9QM74 516 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 SMARCB1Q12824 385 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 SRSF5Q13243 272 aaKnown RBP23.75■■□□□ 1.39
SRRT-218ENST00000620394 WSCD1Q658N2 575 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 IL31Q6EBC2 164 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 Q6ZS52 159 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 CEP68Q76N32 757 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 RALGPS2Q86X27 583 aaPredicted RBP23.75■■□□□ 1.39
SRRT-218ENST00000620394 METTL23Q86XA0 190 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 FAM160A2Q8N612 972 aaPredicted RBP23.75■■□□□ 1.39
SRRT-218ENST00000620394 CXorf38Q8TB03 319 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 C2orf15Q8WU43 125 aaKnown RBP23.75■■□□□ 1.39
SRRT-218ENST00000620394 ZNF396Q96N95 335 aaPredicted RBP23.75■■□□□ 1.39
SRRT-218ENST00000620394 CBWD1Q9BRT8 395 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 MKNK1Q9BUB5 465 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 TMEM206Q9H813 350 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 RBAKQ9NYW8 714 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms