RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KIF2CQ99661 725 aa5□□□□□ -1.61
SNCA-213ENST00000618500 UXTQ9UBK9 157 aaPredicted RBP5□□□□□ -1.61
SNCA-213ENST00000618500 RIF1Q5UIP0 2472 aaKnown RBP5□□□□□ -1.61
SNCA-213ENST00000618500 VPS13AQ96RL7 3174 aa5□□□□□ -1.61
SNCA-213ENST00000618500 ADAMTS9Q9P2N4 1935 aa5□□□□□ -1.61
SNCA-213ENST00000618500 A0A1W2PQD8 194 aa5□□□□□ -1.61
SNCA-213ENST00000618500 ARHGAP33O14559 1287 aa5□□□□□ -1.61
SNCA-213ENST00000618500 CAPN9O14815 690 aa5□□□□□ -1.61
SNCA-213ENST00000618500 CDC45O75419 566 aa5□□□□□ -1.61
SNCA-213ENST00000618500 PRAMEF12O95522 483 aa5□□□□□ -1.61
SNCA-213ENST00000618500 F11P03951 625 aa5□□□□□ -1.61
SNCA-213ENST00000618500 CYP11B2P19099 503 aa5□□□□□ -1.61
SNCA-213ENST00000618500 GJA4P35212 333 aa5□□□□□ -1.61
SNCA-213ENST00000618500 GALK1P51570 392 aa5□□□□□ -1.61
SNCA-213ENST00000618500 SOX4Q06945 474 aaPredicted RBP5□□□□□ -1.61
SNCA-213ENST00000618500 VEPH1Q14D04 833 aa5□□□□□ -1.61
SNCA-213ENST00000618500 EML3Q32P44 896 aa5□□□□□ -1.61
SNCA-213ENST00000618500 ATF7IP2Q5U623 682 aa5□□□□□ -1.61
SNCA-213ENST00000618500 IL27RAQ6UWB1 636 aa5□□□□□ -1.61
SNCA-213ENST00000618500 RPLP0P6Q8NHW5 317 aa5□□□□□ -1.61
SNCA-213ENST00000618500 SPPL2BQ8TCT7 592 aa5□□□□□ -1.61
SNCA-213ENST00000618500 SNRNP27Q8WVK2 155 aaKnown RBP5□□□□□ -1.61
SNCA-213ENST00000618500 HHIPQ96QV1 700 aa5□□□□□ -1.61
SNCA-213ENST00000618500 NACC1Q96RE7 527 aa5□□□□□ -1.61
SNCA-213ENST00000618500 ACO2Q99798 780 aaKnown RBP5□□□□□ -1.61
SNCA-213ENST00000618500 WDR87Q6ZQQ6 2873 aa5□□□□□ -1.61
SNCA-213ENST00000618500 A0A1W2PRU2 124 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ERVH48-1M5A8F1 160 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 SLC26A4O43511 780 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 XPOTO43592 962 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 LZTS3O60299 673 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 NFATC1O95644 943 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 IGLV3-19P01714 112 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 IGHDP01880 384 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 FTH1P19P0C7X4 201 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 HAPLN1P10915 354 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 SPINK2P20155 84 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ABCD1P33897 745 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 NLRP12P59046 1061 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 NLRP5P59047 1200 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 IRX4P78413 519 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 SIM1P81133 766 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 NR1H3Q13133 447 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 GAB4Q2WGN9 574 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 TRIM61Q5EBN2 209 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 DNAJB7Q7Z6W7 309 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 PHTF2Q8N3S3 785 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 PDCD7Q8N8D1 485 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 HASPINQ8TF76 798 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 TNFRSF25Q93038 417 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ECT2Q9H8V3 914 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 CD248Q9HCU0 757 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 POLMQ9NP87 494 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 RBM19Q9Y4C8 960 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 K7EQS6 105 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ZNF217O75362 1048 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 C1SP09871 688 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 BCKDHBP21953 392 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 BRCC3P46736 316 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 PPP3CCP48454 512 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 YWHAHQ04917 246 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 E2F5Q15329 346 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 TRIP6Q15654 476 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 SMAD1Q15797 465 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 ZPBP2Q6X784 338 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 TMEM150AQ86TG1 271 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 TRIM22Q8IYM9 498 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ZNF843Q8N446 348 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ENGASEQ8NFI3 743 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 USP13Q92995 863 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 ZNF274Q96GC6 653 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 MTMR9Q96QG7 549 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 CDT1Q9H211 546 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 SMOC1Q9H4F8 434 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 TTC12Q9H892 705 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 GTSE1Q9NYZ3 720 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ARHGAP28Q9P2N2 729 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 PCOLCE2Q9UKZ9 415 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ARHGAP26Q9UNA1 814 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 PCDHGA1Q9Y5H4 931 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ITPR1Q14643 2758 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 MYH11P35749 1972 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 J3QKU1 62 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 PIGRP01833 764 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 EDN1P05305 212 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 USP17L7P0C7H9 530 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ODC1P11926 461 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 CDC25AP30304 524 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ADD1P35611 737 aaKnown RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 ZNF132P52740 706 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 ASIC1P78348 528 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 FAM160A1Q05DH4 1040 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 GFPT1Q06210 699 aaPredicted RBP4.99□□□□□ -1.61
SNCA-213ENST00000618500 MCL1Q07820 350 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 RTP5Q14D33 572 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 CRY1Q16526 586 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 MPZL3Q6UWV2 235 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 CCDC82Q8N4S0 544 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 DNASE2BQ8WZ79 361 aa4.99□□□□□ -1.61
SNCA-213ENST00000618500 NXPE2Q96DL1 559 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms