RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 DENND3A2RUS2 1198 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 SIGLEC16A6NMB1 481 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 NFIBO00712 420 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 SUPT3HO75486 399 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 MYL2P10916 166 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 KIF22Q14807 665 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 SMAD1Q15797 465 aaKnown RBP14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 ALYREFQ86V81 257 aaKnown RBP14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 ATL2Q8NHH9 583 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 SLC26A7Q8TE54 656 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 TSSK1BQ9BXA7 367 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 SLC17A7Q9P2U7 560 aa14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 STX18Q9P2W9 335 aaKnown RBP14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 SAE1Q9UBE0 346 aaPredicted RBP14.1□□□□□ -0.15
PCDHA11-202ENST00000616325 CCDC195A0A1B0GUA6 201 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 TP73O15350 636 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 RNASEH1O60930 286 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 SERPINB6P35237 376 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 NOVP48745 357 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ACOT2P49753 483 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 PDIA2Q13087 525 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 EFTUD2Q15029 972 aaKnown RBP eCLIP14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 LPCAT4Q643R3 524 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 DPH6Q7L8W6 267 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ARHGAP18Q8N392 663 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 TCP10LQ8TDR4 215 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 USP6NLQ92738 828 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 FAM192AQ9GZU8 254 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ADGRA3Q8IWK6 1321 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 FAM237BA0A1B0GVD1 139 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 RAD17O75943 681 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 GGPS1O95749 300 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 CFHP08603 1231 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ANPEPP15144 967 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ITGB5P18084 799 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ANXA13P27216 316 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 NSFP46459 744 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 GPS1Q13098 491 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 GRAMD1BQ3KR37 738 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 FOXR2Q6PJQ5 311 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 LCA5Q86VQ0 697 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 LDHDQ86WU2 507 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 GLIS1Q8NBF1 620 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 C7orf43Q8WVR3 580 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 PRPF31Q8WWY3 499 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 MANSC1Q9H8J5 431 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 TUFT1Q9NNX1 390 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 NENFQ9UMX5 172 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ALDH18A1P54886 795 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 MED21Q13503 144 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 UGCGQ16739 394 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 ARHGAP24Q8N264 748 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 LMO3Q8TAP4 145 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 GRK7Q8WTQ7 553 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 IFT43Q96FT9 208 aa14.09□□□□□ -0.15
PCDHA11-202ENST00000616325 MEI4A8MW99 385 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 C2CD2LO14523 706 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 SSTR1P30872 391 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 HIRAP54198 1017 aaPredicted RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 RIPOR1Q6ZS17 1223 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 MARK2Q7KZI7 788 aaKnown RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 CCDC110Q8TBZ0 833 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 ZNF668Q96K58 619 aaPredicted RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 ECSITQ9BQ95 431 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 LRRC19Q9H756 370 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 CYP4F11Q9HBI6 524 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 ABCA3Q99758 1704 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 FCHO1O14526 889 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 ZSCAN9O15535 394 aaPredicted RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 VAV1P15498 845 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 YWHABP31946 246 aaKnown RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 AP2B1P63010 937 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 IRX4P78413 519 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 SIX1Q15475 284 aaPredicted RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 C11orf63Q6NUN7 778 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 TMEM270Q6UE05 265 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 MAP7D3Q8IWC1 876 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 CCDC89Q8N998 374 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 MKL1Q969V6 931 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 MTBPQ96DY7 904 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 CLMNQ96JQ2 1002 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 PLEKHG4BQ96PX9 1271 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 NMUR2Q9GZQ4 415 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 PPM1HQ9ULR3 514 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 FRMPD4Q14CM0 1322 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 ECE2O60344 883 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 BGNP21810 368 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 GALK1P51570 392 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 RASA2Q15283 850 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 MMEL1Q495T6 779 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 CRY2Q49AN0 593 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 NCAPG2Q86XI2 1143 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 PHACTR1Q9C0D0 580 aa14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 FHDC1Q9C0D6 1143 aaPredicted RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 RAVER2Q9HCJ3 691 aaKnown RBP14.08□□□□□ -0.16
PCDHA11-202ENST00000616325 TNRC6CQ9HCJ0 1690 aaKnown RBP14.07□□□□□ -0.16
PCDHA11-202ENST00000616325 MAGEB3O15480 346 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms