RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 M0QYT0 321 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 GZMAP12544 262 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 GRK4P32298 578 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 CCZ1BP86790 482 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 CCZ1P86791 482 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 MDH1BQ5I0G3 518 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 MAP3K21Q5TCX8 1036 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 NT5DC1Q5TFE4 455 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 CDKAL1Q5VV42 579 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 RAD9BQ6WBX8 426 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 SPATS2Q86XZ4 545 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PPHLN1Q8NEY8 458 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 ARHGEF26Q96DR7 871 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 HTATIP2Q9BUP3 242 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 DDX23Q9BUQ8 820 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 CELF4Q9BZC1 486 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 WDCPQ9H6R7 721 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 ABCB6Q9NP58 842 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 IRAK4Q9NWZ3 460 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 DDX43Q9NXZ2 648 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 ALG6Q9Y672 507 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 ATRNL1Q5VV63 1379 aa9.9□□□□□ -0.83
CLTCL1-208ENST00000615606 F5H423 210 aaPredicted RBP9.9□□□□□ -0.83
CLTCL1-208ENST00000615606 COPEO14579 308 aa9.9□□□□□ -0.83
CLTCL1-208ENST00000615606 ATG16L1Q676U5 607 aa9.9□□□□□ -0.83
CLTCL1-208ENST00000615606 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.83
CLTCL1-208ENST00000615606 NOVA2Q9UNW9 492 aaKnown RBP9.9□□□□□ -0.83
CLTCL1-208ENST00000615606 TNFSF13BQ9Y275 285 aa9.9□□□□□ -0.83
CLTCL1-208ENST00000615606 LACTBL1A8MY62 500 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 HMGB1P1B2RPK0 211 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 PHF2O75151 1096 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 MBL2P11226 248 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 GLRA2P23416 452 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 MRPS25P82663 173 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 CCDC15Q0P6D6 951 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 CASP8Q14790 479 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 NAA25Q14CX7 972 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 KCNK18Q7Z418 384 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 NOP9Q86U38 636 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 ABRAQ8N0Z2 381 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 SPDYE1Q8NFV5 336 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 ETNPPLQ8TBG4 499 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 RAPGEF5Q92565 580 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 CDK5RAP1Q96SZ6 601 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 EMILIN2Q9BXX0 1053 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 COL1A2P08123 1366 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 ZBTB39O15060 712 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 ATMINO43313 823 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 SNX2O60749 519 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 SARSP49591 514 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 PMS2P54278 862 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 ORC1Q13415 861 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 NNTQ13423 1086 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 E2F4Q16254 413 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 SHROOM1Q2M3G4 852 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 MMEL1Q495T6 779 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 C4orf22Q6V702 233 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 TAS2R42Q7RTR8 314 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 AMIGO3Q86WK7 504 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 SPATA4Q8NEY3 305 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 DNAJC7Q99615 494 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 USP27XA6NNY8 438 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 CKMP06732 381 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 MMEP08473 750 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 RAP1GAPP47736 663 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 KPNA1P52294 538 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 FUT2Q10981 343 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 RABGAP1LQ5R372 815 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 PPM1NQ8N819 430 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 DLG5Q8TDM6 1919 aa9.89□□□□□ -0.83
CLTCL1-208ENST00000615606 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 IGKV6D-41A0A0C4DH26 115 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ARHGAP42A6NI28 874 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 F8VZ95 297 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ATP9AO75110 1047 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 RTP1P59025 263 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ZNF177Q13360 481 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CDH18Q13634 790 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 RBBP5Q15291 538 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 FAM171A1Q5VUB5 890 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 JADE1Q6IE81 842 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ZBED8Q8IZ13 594 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 RUBCNQ92622 972 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 PAK5Q9P286 719 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 PLAAQ9Y263 795 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 F5H5T6 163 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 SMAPO00193 183 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 RECQL4O94761 1208 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 FARP2O94887 1054 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 LYPLA2O95372 231 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 PAX3P23760 479 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 EPHB2P29323 1055 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CRYBB1P53674 252 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 GCNT1Q02742 428 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 HIF1AQ16665 826 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 RASSF3Q86WH2 238 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 UROC1Q96N76 676 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 VCXQ9H320 206 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 MRFAP1Q9Y605 127 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms