RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PDK4Q16654 411 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 TCHHL1Q5QJ38 904 aaPredicted RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 RINLQ6ZS11 566 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 EZH1Q92800 747 aaPredicted RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 POLR3CQ9BUI4 534 aaPredicted RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 TXLNGYQ9BZA5 131 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 BCL9LQ86UU0 1499 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 GSC2O15499 205 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 GZMAP12544 262 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 TCN1P20061 433 aaPredicted RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 CCNFP41002 786 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 GAD2Q05329 585 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 HIC1Q14526 733 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 GALNTL6Q49A17 601 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 CGB2Q6NT52 195 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 LARGE2Q8N3Y3 721 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 INPP5DQ92835 1189 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 RBM41Q96IZ5 413 aaKnown RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 WDR18Q9BV38 432 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 SMYD2Q9NRG4 433 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 SLC9A2Q9UBY0 812 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 IVNS1ABPQ9Y6Y0 642 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 MYH1P12882 1939 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 MYH4Q9Y623 1939 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 BPIFB4P59827 614 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 SLC25A3Q00325 362 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 KRT81Q14533 505 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 EML3Q32P44 896 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 PPP6R3Q5H9R7 873 aaPredicted RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 CDCA2Q69YH5 1023 aaPredicted RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 NLRX1Q86UT6 975 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 RNF148Q8N7C7 305 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 ACER1Q8TDN7 264 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 SEC14L1Q92503 715 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 ZNF395Q9H8N7 513 aaPredicted RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 PRM3Q9NNZ6 103 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 PIH1D1Q9NWS0 290 aaKnown RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 SENP1Q9P0U3 644 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 KCPQ6ZWJ8 1503 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 SYNJ2BP-COX16A0A087WUM0 186 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 F8VP50 259 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 FSCN2O14926 492 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 MAP3K13O43283 966 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 YWHABP31946 246 aaKnown RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 SREBF1P36956 1147 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 RPL7AP62424 266 aaKnown RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 FAAP100Q0VG06 881 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 KLHL38Q2WGJ6 581 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 DEPTORQ8TB45 409 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 PPP4R1Q8TF05 950 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 TRIM11Q96F44 468 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 GORASP1Q9BQQ3 440 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 STK32BQ9NY57 414 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 COX16Q9P0S2 106 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 GRAP2O75791 330 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 APRTP07741 180 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 SCNN1BP51168 640 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 YARSP54577 528 aaKnown RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 CCNG2Q16589 344 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 HADHQ16836 314 aaKnown RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 PARP6Q2NL67 630 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 LPCAT4Q643R3 524 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 SYDE1Q6ZW31 735 aaPredicted RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 EMC1Q8N766 993 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 CEP120Q8N960 986 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 ACTL9Q8TC94 416 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 FAM81BQ96LP2 452 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 TMEM165Q9HC07 324 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 SEPT10Q9P0V9 454 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 APPL1Q9UKG1 709 aa12.35□□□□□ -0.43
CDH5-208ENST00000614547 MTO1Q9Y2Z2 717 aaKnown RBP12.35□□□□□ -0.43
CDH5-208ENST00000614547 NEMP1O14524 444 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 TBX3O15119 743 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 ADCY3O60266 1144 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 ASMTLO95671 621 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 HLA-DRAP01903 254 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 RFX1P22670 979 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 HIRAP54198 1017 aaPredicted RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 OTUD4Q01804 1114 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 SLC45A4Q5BKX6 768 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 RIBC1Q8N443 379 aaPredicted RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 SH3TC2Q8TF17 1288 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 MPP4Q96JB8 637 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 NDNQ99608 321 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 TRIM56Q9BRZ2 755 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 DNALI1O14645 258 aaPredicted RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms