RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CEP68Q76N32 757 aa19.28■□□□□ 0.68
SMN2-213ENST00000614240 BRAPQ7Z569 592 aa19.28■□□□□ 0.68
SMN2-213ENST00000614240 LONP2Q86WA8 852 aa19.28■□□□□ 0.68
SMN2-213ENST00000614240 SPPL2BQ8TCT7 592 aa19.28■□□□□ 0.68
SMN2-213ENST00000614240 FIZ1Q96SL8 496 aa19.28■□□□□ 0.68
SMN2-213ENST00000614240 SMG9Q9H0W8 520 aaKnown RBP19.28■□□□□ 0.68
SMN2-213ENST00000614240 KPNA7A9QM74 516 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 HRO43593 1189 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 HAPLN1P10915 354 aaPredicted RBP19.27■□□□□ 0.68
SMN2-213ENST00000614240 ATF6P18850 670 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 WEE1P30291 646 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 AVPR1AP37288 418 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 SRSF5Q13243 272 aaKnown RBP19.27■□□□□ 0.68
SMN2-213ENST00000614240 ITPRIPL2Q3MIP1 535 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 SV2CQ496J9 727 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 DYMQ7RTS9 669 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 SFR1Q86XK3 245 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 ZNF560Q96MR9 790 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 ST6GALNAC4Q9H4F1 302 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 CCDC39Q9UFE4 941 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 COL4A2P08572 1712 aa19.27■□□□□ 0.68
SMN2-213ENST00000614240 IL18RAPO95256 599 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 TSPY1Q01534 308 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 BFSP1Q12934 665 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 ZNF720Q7Z2F6 126 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 LRRTM3Q86VH5 581 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 SYNPOQ8N3V7 929 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 SLC46A2Q9BY10 475 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 CCSER1Q9C0I3 900 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 MRPL44Q9H9J2 332 aaKnown RBP19.26■□□□□ 0.67
SMN2-213ENST00000614240 IL21Q9HBE4 155 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 GKN1Q9NS71 199 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 ZMYM5Q9UJ78 669 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 EXOC7Q9UPT5 735 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 PCDHB5Q9Y5E4 795 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.26■□□□□ 0.67
SMN2-213ENST00000614240 DMDP11532 3685 aa19.26■□□□□ 0.67
SMN2-213ENST00000614240 K7ESF4 209 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 LRP3O75074 770 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 PAPSS2O95340 614 aaPredicted RBP19.25■□□□□ 0.67
SMN2-213ENST00000614240 PNPLA4P41247 253 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 TFAMQ00059 246 aaKnown RBP19.25■□□□□ 0.67
SMN2-213ENST00000614240 POU5F1Q01860 360 aaKnown RBP19.25■□□□□ 0.67
SMN2-213ENST00000614240 CMTM8Q8IZV2 173 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 MAB21L3Q8N8X9 362 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 HVCN1Q96D96 273 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 EPSTI1Q96J88 318 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 FAM213AQ9BRX8 229 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 IKZF4Q9H2S9 585 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 SEMA4GQ9NTN9 838 aa19.25■□□□□ 0.67
SMN2-213ENST00000614240 MAGED2Q9UNF1 606 aaPredicted RBP19.25■□□□□ 0.67
SMN2-213ENST00000614240 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.24■□□□□ 0.67
SMN2-213ENST00000614240 VPS37CA5D8V6 355 aaPredicted RBP19.24■□□□□ 0.67
SMN2-213ENST00000614240 PRPF40AO75400 957 aaKnown RBP19.24■□□□□ 0.67
SMN2-213ENST00000614240 GRSF1Q12849 480 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMN2-213ENST00000614240 WDR44Q5JSH3 913 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 RRAGBQ5VZM2 374 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 CC2D1AQ6P1N0 951 aaPredicted RBP19.24■□□□□ 0.67
SMN2-213ENST00000614240 NT5DC4Q86YG4 428 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 EFCAB13Q8IY85 973 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 NETO1Q8TDF5 533 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 NOC3LQ8WTT2 800 aaKnown RBP19.24■□□□□ 0.67
SMN2-213ENST00000614240 ACCSQ96QU6 501 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 PI4K2AQ9BTU6 479 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 TBC1D7Q9P0N9 293 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 STK17AQ9UEE5 414 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 NCOR2Q9Y618 2525 aa19.24■□□□□ 0.67
SMN2-213ENST00000614240 DDX6P26196 483 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMN2-213ENST00000614240 TXLNAP40222 546 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 NLRP12P59046 1061 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 CCINQ13939 588 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 CSRP2Q16527 193 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 NFE2Q16621 373 aaPredicted RBP19.23■□□□□ 0.67
SMN2-213ENST00000614240 CRELD2Q6UXH1 353 aaPredicted RBP19.23■□□□□ 0.67
SMN2-213ENST00000614240 USP49Q70CQ1 688 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 SV2BQ7L1I2 683 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 SYCP3Q8IZU3 236 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 CACTINQ8WUQ7 758 aaKnown RBP19.23■□□□□ 0.67
SMN2-213ENST00000614240 MRPS31Q92665 395 aaKnown RBP19.23■□□□□ 0.67
SMN2-213ENST00000614240 C2orf42Q9NWW7 574 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 SEL1LQ9UBV2 794 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 AGAP1Q9UPQ3 857 aa19.23■□□□□ 0.67
SMN2-213ENST00000614240 DCHS1Q96JQ0 3298 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 DMXL1Q9Y485 3027 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 HUS1O60921 280 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 GCNT3O95395 438 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 F11P03951 625 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 CSH1P0DML2 217 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 CSH2P0DML3 217 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 IDEP14735 1019 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 GAP43P17677 238 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 ADSSP30520 456 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 POLR2BP30876 1174 aaKnown RBP19.22■□□□□ 0.67
SMN2-213ENST00000614240 HOXA6P31267 233 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 RPL10AP62906 217 aaKnown RBP19.22■□□□□ 0.67
SMN2-213ENST00000614240 AMPD2Q01433 879 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 RUNX3Q13761 415 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 TXNDC8Q6A555 127 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 PRR23CQ6ZRP0 262 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms