RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CYP4A11Q02928 519 aa23.17■■□□□ 1.3
POLR2J3-220ENST00000613744 FAM43BQ6ZT52 329 aaPredicted RBP23.17■■□□□ 1.3
POLR2J3-220ENST00000613744 SLC13A5Q86YT5 568 aaPredicted RBP23.17■■□□□ 1.3
POLR2J3-220ENST00000613744 RIT2Q99578 217 aa23.17■■□□□ 1.3
POLR2J3-220ENST00000613744 CCDC77Q9BR77 488 aa23.17■■□□□ 1.3
POLR2J3-220ENST00000613744 HAO1Q9UJM8 370 aa23.17■■□□□ 1.3
POLR2J3-220ENST00000613744 SLC4A7Q9Y6M7 1214 aa23.17■■□□□ 1.3
POLR2J3-220ENST00000613744 MTA2O94776 668 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 GH1P01241 217 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 KRT18P05783 430 aaKnown RBP23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 TGFB3P10600 412 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 ABCB4P21439 1286 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 RFX1P22670 979 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 TARSP26639 723 aaKnown RBP23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 MAN1A1P33908 653 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 TNFAIP2Q03169 654 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 NFIL3Q16649 462 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 CCDC25Q86WR0 208 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 ZNF398Q8TD17 642 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 VTI1AQ96AJ9 217 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 TUBB6Q9BUF5 446 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 THAP2Q9H0W7 228 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 DENND2DQ9H6A0 471 aaPredicted RBP23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 COG5Q9UP83 839 aa23.16■■□□□ 1.3
POLR2J3-220ENST00000613744 FAM47DPA6NHR8 397 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 E9PMD0 336 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 ACSL3O95573 720 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 T-ENOLP0DO92 83 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 STAT4Q14765 748 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 LRRC23Q53EV4 343 aaPredicted RBP23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 CTU1Q7Z7A3 348 aaKnown RBP23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 SLAIN1Q8ND83 568 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 ERMNQ8TAM6 284 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 RBM47A0AV96 593 aaKnown RBP23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 POTEB3A0JP26 581 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 ANKRD63C9JTQ0 380 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 MAP3K13O43283 966 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 CCNE2O96020 404 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 NR3C1P04150 777 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 MUTP22033 750 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 FOXN2P32314 431 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 SLC12A3P55017 1021 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 RNASELQ05823 741 aaKnown RBP23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 PPP2R5CQ13362 524 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 KPNB1Q14974 876 aaKnown RBP23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 SLC45A4Q5BKX6 768 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 TCERG1LQ5VWI1 586 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 POTEBQ6S5H4 581 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 RELL1Q8IUW5 271 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 ZDHHC14Q8IZN3 488 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 ATL2Q8NHH9 583 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 MAIP1Q8WWC4 291 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 JPH1Q9HDC5 661 aaPredicted RBP23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 TBC1D22BQ9NU19 505 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 KIAA1024Q9UPX6 916 aa23.15■■□□□ 1.3
POLR2J3-220ENST00000613744 EIF4E1BA6NMX2 242 aaKnown RBP23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 MED24O75448 989 aa23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 DRAP1Q14919 205 aaPredicted RBP23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 IQSEC1Q6DN90 963 aa23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 CEP128Q6ZU80 1094 aa23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 SENP7Q9BQF6 1050 aa23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 LARSQ9P2J5 1176 aaKnown RBP23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 TCEAL9Q9UHQ7 104 aa23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 PHTF1Q9UMS5 762 aa23.14■■□□□ 1.29
POLR2J3-220ENST00000613744 FARP2O94887 1054 aaPredicted RBP23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 SIX1Q15475 284 aaPredicted RBP23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 DUSP28Q4G0W2 176 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 CELF3Q5SZQ8 465 aaKnown RBP23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 RNF220Q5VTB9 566 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 PTPRN2Q92932 1015 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 BORCS6Q96GS4 357 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 SNF8Q96H20 258 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 EIF2AK1Q9BQI3 630 aaKnown RBP23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 VCX3BQ9H321 246 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 VCX3AQ9NNX9 186 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 MLXIPLQ9NP71 852 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 SLC9A2Q9UBY0 812 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 DNAJC12Q9UKB3 198 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 UPP2O95045 317 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 ASMTLO95671 621 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 EPHB2P29323 1055 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 CTTNQ14247 550 aaKnown RBP23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 CCDC6Q16204 474 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 HSDL1Q3SXM5 330 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 GJB7Q6PEY0 223 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 POTEGQ6S5H5 508 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 C4orf50Q6ZRC1 276 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 CATSPER3Q86XQ3 398 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 NR1H4Q96RI1 486 aaPredicted RBP23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 PAIP2Q9BPZ3 127 aaKnown RBP23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 MKNK1Q9BUB5 465 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 EURLQ9NYK6 297 aa23.13■■□□□ 1.29
POLR2J3-220ENST00000613744 PRPF4O43172 522 aaKnown RBP eCLIP23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 DYNC1LI2O43237 492 aaPredicted RBP23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 POLE2P56282 527 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 ARSHQ5FYA8 562 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 MIER3Q7Z3K6 550 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 TTC8Q8TAM2 541 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 NCSTNQ92542 709 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 KRT35Q92764 455 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms