RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 SMAD4Q13485 552 aaKnown RBP17.78■□□□□ 0.44
IRF1-211ENST00000613424 PUS10Q3MIT2 529 aaKnown RBP17.78■□□□□ 0.44
IRF1-211ENST00000613424 SLC39A12Q504Y0 691 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 HSP90AA4PQ58FG1 418 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 LIN9Q5TKA1 542 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 SCARA5Q6ZMJ2 495 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 FAM114A1Q8IWE2 563 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 TCEAL8Q8IYN2 117 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 CCDC150Q8NCX0 1101 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 CMASQ8NFW8 434 aaPredicted RBP17.78■□□□□ 0.44
IRF1-211ENST00000613424 OR6B3Q8NGW1 331 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 FUCA2Q9BTY2 467 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 SDCBP2Q9H190 292 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 SNX25Q9H3E2 840 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 CYP4F11Q9HBI6 524 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 ZDHHC7Q9NXF8 308 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 MAFFQ9ULX9 164 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 NFE2L3Q9Y4A8 694 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 NME7Q9Y5B8 376 aa17.78■□□□□ 0.44
IRF1-211ENST00000613424 SYCE3A1L190 88 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 P4HA2O15460 535 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 N4BP1O75113 896 aaKnown RBP17.77■□□□□ 0.44
IRF1-211ENST00000613424 PAPLNO95428 1278 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 WEE2P0C1S8 567 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 PCSK1P29120 753 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 ASPAP45381 313 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 MTIF2P46199 727 aaKnown RBP17.77■□□□□ 0.44
IRF1-211ENST00000613424 RAP1GAPP47736 663 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 CDR1P51861 262 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 TSPY1Q01534 308 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 ANO6Q4KMQ2 910 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 WDR44Q5JSH3 913 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 INTS6LQ5JSJ4 861 aaKnown RBP17.77■□□□□ 0.44
IRF1-211ENST00000613424 PPM1LQ5SGD2 360 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 CES5AQ6NT32 575 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 CCDC149Q6ZUS6 474 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 RTL10Q7L3V2 364 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 DCP1BQ8IZD4 617 aaKnown RBP17.77■□□□□ 0.44
IRF1-211ENST00000613424 ATAD1Q8NBU5 361 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 SLC7A14Q8TBB6 771 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 TATDN2Q93075 761 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 TMLHEQ9NVH6 421 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 MAGEC2Q9UBF1 373 aaPredicted RBP17.77■□□□□ 0.44
IRF1-211ENST00000613424 CDH22Q9UJ99 828 aa17.77■□□□□ 0.44
IRF1-211ENST00000613424 USP15Q9Y4E8 981 aaPredicted RBP17.77■□□□□ 0.44
IRF1-211ENST00000613424 MTMR11A4FU01 709 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 PRRG1O14668 218 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 ATP2C2O75185 946 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 BMP1P13497 986 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 CETN1Q12798 172 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 DUSP4Q13115 394 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 GPR149Q86SP6 731 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 SUSD6Q92537 303 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 ZNF707Q96C28 371 aaPredicted RBP17.76■□□□□ 0.43
IRF1-211ENST00000613424 PKMYT1Q99640 499 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 BCO2Q9BYV7 579 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 PRKD2Q9BZL6 878 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 NIF3L1Q9GZT8 377 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 CRISPLD1Q9H336 500 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 GTF3C4Q9UKN8 822 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 CDH9Q9ULB4 789 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 SLC27A5Q9Y2P5 690 aa17.76■□□□□ 0.43
IRF1-211ENST00000613424 MYBPHLA2RUH7 354 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 A8MXQ7 604 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 KCNJ18B7U540 433 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 HNRNPA1P09651 372 aaKnown RBP eCLIP17.75■□□□□ 0.43
IRF1-211ENST00000613424 IL9P15248 144 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 MYL5Q02045 173 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 SMARCB1Q12824 385 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 KCNJ12Q14500 433 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 SMAD2Q15796 467 aaKnown RBP17.75■□□□□ 0.43
IRF1-211ENST00000613424 ZSCAN23Q3MJ62 389 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 TCP11X2Q5H9J9 407 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 ATAT1Q5SQI0 421 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 FAM171BQ6P995 826 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 EHBP1Q8NDI1 1231 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 LMO3Q8TAP4 145 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 FAXDC2Q96IV6 333 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 SYT15Q9BQS2 421 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 NAT10Q9H0A0 1025 aaKnown RBP17.75■□□□□ 0.43
IRF1-211ENST00000613424 CYP3A43Q9HB55 503 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 FANCLQ9NW38 375 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 FAM50BQ9Y247 325 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 C5orf42Q9H799 3197 aa17.75■□□□□ 0.43
IRF1-211ENST00000613424 CCL16O15467 120 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 HOXA9P31269 272 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 PSMC1P62191 440 aaKnown RBP17.74■□□□□ 0.43
IRF1-211ENST00000613424 LRMPQ12912 555 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 NCAPHQ15003 741 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 NFE2Q16621 373 aaPredicted RBP17.74■□□□□ 0.43
IRF1-211ENST00000613424 MAN2A1Q16706 1144 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 CCDC142Q17RM4 750 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 CDKAL1Q5VV42 579 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 CYP26C1Q6V0L0 522 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 SPPL2BQ8TCT7 592 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 C2orf15Q8WU43 125 aaKnown RBP17.74■□□□□ 0.43
IRF1-211ENST00000613424 SMG7Q92540 1137 aaKnown RBP17.74■□□□□ 0.43
IRF1-211ENST00000613424 RIPOR3Q96MK2 946 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 LPIN3Q9BQK8 851 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 BPIFA3Q9BQP9 254 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms