RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 SPIRE2Q8WWL2 714 aa12.8□□□□□ -0.36
FDPS-220ENST00000611010 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
FDPS-220ENST00000611010 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
FDPS-220ENST00000611010 ATXN3LQ9H3M9 355 aa12.8□□□□□ -0.36
FDPS-220ENST00000611010 LMBRD1Q9NUN5 540 aa12.8□□□□□ -0.36
FDPS-220ENST00000611010 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
FDPS-220ENST00000611010 PLXND1Q9Y4D7 1925 aa12.8□□□□□ -0.36
FDPS-220ENST00000611010 OR6C75A6NL08 312 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 LACTBL1A8MY62 500 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 RPP40O75818 363 aaKnown RBP12.79□□□□□ -0.36
FDPS-220ENST00000611010 MBD3O95983 291 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 ADRB2P07550 413 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 PLS3P13797 630 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 TYMPP19971 482 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 CYP3A5P20815 502 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 WEE1P30291 646 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 NMT1P30419 496 aaKnown RBP12.79□□□□□ -0.36
FDPS-220ENST00000611010 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 MYBPC2Q14324 1141 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 PDIA5Q14554 519 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 STPG1Q5TH74 334 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 FAM83CQ9BQN1 747 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 TMEM121BQ9BXQ6 578 aaPredicted RBP12.79□□□□□ -0.36
FDPS-220ENST00000611010 SLC46A2Q9BY10 475 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 C17orf75Q9HAS0 396 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 UBQLN1Q9UMX0 589 aaKnown RBP12.79□□□□□ -0.36
FDPS-220ENST00000611010 WASF3Q9UPY6 502 aa12.79□□□□□ -0.36
FDPS-220ENST00000611010 ANTXRLA6NF34 631 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 GIPC1O14908 333 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 RNF40O75150 1001 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 TADA3O75528 432 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 KCNK5O95279 499 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 F13A1P00488 732 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 EGFP01133 1207 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 NFICP08651 508 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 CLTAP09496 248 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
FDPS-220ENST00000611010 ARSAP15289 507 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 MARCKSP29966 332 aaPredicted RBP12.78□□□□□ -0.36
FDPS-220ENST00000611010 MPLP40238 635 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 SLC12A3P55017 1021 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 LILRA4P59901 499 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 SAFBQ15424 915 aaKnown RBP eCLIP12.78□□□□□ -0.36
FDPS-220ENST00000611010 ITPRIPL2Q3MIP1 535 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 PLK5Q496M5 336 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 HYIQ5T013 277 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 IL31Q6EBC2 164 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 JADE1Q6IE81 842 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 LRRTM3Q86VH5 581 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 SYNPOQ8N3V7 929 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 KCNN1Q92952 543 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 LOXL4Q96JB6 756 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 LLPHQ9BRT6 129 aaKnown RBP12.78□□□□□ -0.36
FDPS-220ENST00000611010 ZCWPW1Q9H0M4 648 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 DUSP15Q9H1R2 295 aaPredicted RBP12.78□□□□□ -0.36
FDPS-220ENST00000611010 TASP1Q9H6P5 420 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 ASB3Q9Y575 518 aa12.78□□□□□ -0.36
FDPS-220ENST00000611010 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 CCDC163A0A0D9SF12 145 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 ANO9A1A5B4 782 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 VPS37CA5D8V6 355 aaPredicted RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 C1QTNF9BB2RNN3 333 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 TISP43B9A030 160 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 DCLK1O15075 740 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 CLDN3O15551 220 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 CYP11A1P05108 521 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 U2AF2P26368 475 aaKnown RBP eCLIP12.77□□□□□ -0.374e-6■□□□□ 10.9
FDPS-220ENST00000611010 GPR15P49685 360 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 PPP2R3AQ06190 1150 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 STRN3Q13033 797 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 SLC39A12Q504Y0 691 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 C9orf57Q5W0N0 161 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 DSTYKQ6XUX3 929 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 CACNA2D4Q7Z3S7 1137 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 USP37Q86T82 979 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 C12orf50Q8NA57 414 aaPredicted RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 FAM200AQ8TCP9 573 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 DDX1Q92499 740 aaKnown RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 ZC3H10Q96K80 434 aaKnown RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 FIZ1Q96SL8 496 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 SEPT5Q99719 369 aaPredicted RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 LSM14BQ9BX40 385 aaKnown RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 EBF3Q9H4W6 596 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 GKN1Q9NS71 199 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 TMLHEQ9NVH6 421 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms