RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 P4HA1P13674 534 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 IFFO1Q0D2I5 559 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 SLMAPQ14BN4 828 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 NIPA2Q8N8Q9 360 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 SLC4A11Q8NBS3 891 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 C2CD2Q9Y426 696 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 CILPO75339 1184 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 GAS8O95995 478 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 PTPN20Q4JDL3 420 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 RNF25Q96BH1 459 aaPredicted RBP29.67■■■□□ 2.34
CSPG5-205ENST00000610462 ASIC3Q9UHC3 531 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 ITGA11Q9UKX5 1188 aa29.67■■■□□ 2.34
CSPG5-205ENST00000610462 RRN3P2A6NIE6 340 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 F8VP50 259 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 ADCY6O43306 1168 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 TCF4P15884 667 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 ITIH2P19823 946 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 NFX1Q12986 1120 aaKnown RBP29.66■■■□□ 2.34
CSPG5-205ENST00000610462 KRT71Q3SY84 523 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 DENND2CQ68D51 928 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 ANKS1BQ7Z6G8 1248 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 NT5DC4Q86YG4 428 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 HPDLQ96IR7 371 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 ELOVL4Q9GZR5 314 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 CYTH4Q9UIA0 394 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 AGAP1Q9UPQ3 857 aa29.66■■■□□ 2.34
CSPG5-205ENST00000610462 CELF2O95319 508 aaKnown RBP29.65■■■□□ 2.34
CSPG5-205ENST00000610462 PTPN11Q06124 597 aaPredicted RBP29.65■■■□□ 2.34
CSPG5-205ENST00000610462 ATP13A4Q4VNC1 1196 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 ARFGAP2Q8N6H7 521 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 TMEM176AQ96HP8 235 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 SLITRK1Q96PX8 696 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 TWNKQ96RR1 684 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 SLC5A4Q9NY91 659 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 RARGP13631 454 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 GRM5P41594 1212 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 PDCLQ13371 301 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 TTC19Q6DKK2 380 aaPredicted RBP29.65■■■□□ 2.34
CSPG5-205ENST00000610462 SNF8Q96H20 258 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 CCDC114Q96M63 670 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 SETD4Q9NVD3 440 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 HMGXB4Q9UGU5 601 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 RALGAPA2Q2PPJ7 1873 aa29.65■■■□□ 2.34
CSPG5-205ENST00000610462 STAU1O95793 577 aaKnown RBP29.64■■■□□ 2.34
CSPG5-205ENST00000610462 KRT1P04264 644 aa29.64■■■□□ 2.34
CSPG5-205ENST00000610462 DPP3Q9NY33 737 aa29.64■■■□□ 2.34
CSPG5-205ENST00000610462 BCCIPQ9P287 314 aaKnown RBP eCLIP29.64■■■□□ 2.34
CSPG5-205ENST00000610462 SIGLEC16A6NMB1 481 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 IVDP26440 423 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 RBP5P82980 135 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 ORC1Q13415 861 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 DCAF4L1Q3SXM0 396 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 HOOK3Q86VS8 718 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 SEMA4AQ9H3S1 761 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 KLHL11Q9NVR0 708 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 NEU2Q9Y3R4 380 aa29.64■■■□□ 2.33
CSPG5-205ENST00000610462 TRIP11Q15643 1979 aa29.63■■■□□ 2.33
CSPG5-205ENST00000610462 TP73O15350 636 aa29.63■■■□□ 2.33
CSPG5-205ENST00000610462 GSCP56915 257 aaPredicted RBP29.63■■■□□ 2.33
CSPG5-205ENST00000610462 COPS2P61201 443 aa29.63■■■□□ 2.33
CSPG5-205ENST00000610462 ADAMTS10Q9H324 1103 aa29.63■■■□□ 2.33
CSPG5-205ENST00000610462 DDX56Q9NY93 547 aaKnown RBP29.63■■■□□ 2.33
CSPG5-205ENST00000610462 WDR35Q9P2L0 1181 aa29.63■■■□□ 2.33
CSPG5-205ENST00000610462 PI4K2BG5E9Z4 385 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 SHBGP04278 402 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 FGFR4P22455 802 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 ZFYVE27Q5T4F4 411 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 RHBDF2Q6PJF5 856 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 FAM124BQ9H5Z6 455 aaPredicted RBP29.62■■■□□ 2.33
CSPG5-205ENST00000610462 LRRC4CQ9HCJ2 640 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 GOLGA8SH3BPF8 625 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 MICAL2O94851 1124 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 VDRP11473 427 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 KRT3P12035 628 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 HPDP32754 393 aaPredicted RBP29.62■■■□□ 2.33
CSPG5-205ENST00000610462 PSMC1P62191 440 aaKnown RBP29.62■■■□□ 2.33
CSPG5-205ENST00000610462 SLC29A2Q14542 456 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 KIZQ2M2Z5 673 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 FOXR1Q6PIV2 292 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 MFSD7Q6UXD7 560 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 TJP2Q9UDY2 1190 aa29.62■■■□□ 2.33
CSPG5-205ENST00000610462 NOVA2Q9UNW9 492 aaKnown RBP29.62■■■□□ 2.33
CSPG5-205ENST00000610462 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.62■■■□□ 2.33
CSPG5-205ENST00000610462 DYNC1LI2O43237 492 aaPredicted RBP29.61■■■□□ 2.33
CSPG5-205ENST00000610462 PTPN7P35236 360 aa29.61■■■□□ 2.33
CSPG5-205ENST00000610462 RFC1P35251 1148 aaPredicted RBP29.61■■■□□ 2.33
CSPG5-205ENST00000610462 MDH1P40925 334 aaKnown RBP29.61■■■□□ 2.33
CSPG5-205ENST00000610462 CDC42EP1Q00587 391 aa29.61■■■□□ 2.33
CSPG5-205ENST00000610462 SPOCD1Q6ZMY3 1216 aa29.61■■■□□ 2.33
CSPG5-205ENST00000610462 KIF12Q96FN5 646 aa29.61■■■□□ 2.33
CSPG5-205ENST00000610462 CPXM1Q96SM3 734 aa29.61■■■□□ 2.33
CSPG5-205ENST00000610462 A6NJR5 290 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 TJP3O95049 919 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 ATF2P15336 505 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 CAV1Q03135 178 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 INCA1Q0VD86 236 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 ZNF268Q14587 947 aaPredicted RBP29.6■■■□□ 2.33
CSPG5-205ENST00000610462 APBB1IPQ7Z5R6 666 aaPredicted RBP29.6■■■□□ 2.33
CSPG5-205ENST00000610462 XYLT1Q86Y38 959 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 FNIP1Q8TF40 1166 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms