RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 ZACNQ401N2 412 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 GET4Q7L5D6 327 aaPredicted RBP13.68□□□□□ -0.22
CD9-212ENST00000610354 FAM186BQ8IYM0 893 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 ADGRF2Q8IZF7 708 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 TMEM86AQ8N2M4 240 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 ST13P5Q8NFI4 369 aaPredicted RBP13.68□□□□□ -0.22
CD9-212ENST00000610354 RSAD2Q8WXG1 361 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 TCEAL4Q96EI5 215 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 IPO9Q96P70 1041 aaKnown RBP13.68□□□□□ -0.22
CD9-212ENST00000610354 DCBLD2Q96PD2 775 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 MRPL45Q9BRJ2 306 aaKnown RBP13.68□□□□□ -0.22
CD9-212ENST00000610354 LMBRD1Q9NUN5 540 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 DDX43Q9NXZ2 648 aaKnown RBP13.68□□□□□ -0.22
CD9-212ENST00000610354 EPS15L1Q9UBC2 864 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
CD9-212ENST00000610354 FRMD4BQ9Y2L6 1034 aa13.68□□□□□ -0.22
CD9-212ENST00000610354 ATP2C2O75185 946 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 LRRN2O75325 713 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 LAMP2P13473 410 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 ALADP13716 330 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 WARSP23381 471 aaKnown RBP13.67□□□□□ -0.22
CD9-212ENST00000610354 PSMC2P35998 433 aaKnown RBP13.67□□□□□ -0.22
CD9-212ENST00000610354 AP3M2P53677 418 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 CAMK4Q16566 473 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 PABPC1LQ4VXU2 614 aaKnown RBP13.67□□□□□ -0.22
CD9-212ENST00000610354 INTS6LQ5JSJ4 861 aaKnown RBP13.67□□□□□ -0.22
CD9-212ENST00000610354 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 SPATA18Q8TC71 538 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 EDAQ92838 391 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 ACSF2Q96CM8 615 aaPredicted RBP13.67□□□□□ -0.22
CD9-212ENST00000610354 DUSP9Q99956 384 aaKnown RBP13.67□□□□□ -0.22
CD9-212ENST00000610354 LPIN3Q9BQK8 851 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 ACBD6Q9BR61 282 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 CORO1BQ9BR76 489 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 SDCBP2Q9H190 292 aa13.67□□□□□ -0.22
CD9-212ENST00000610354 AVENQ9NQS1 362 aaPredicted RBP13.67□□□□□ -0.22
CD9-212ENST00000610354 DENND4CQ5VZ89 1909 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 MYBPHLA2RUH7 354 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 IKBKBO14920 756 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
CD9-212ENST00000610354 CEBPBP17676 345 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 ATF6P18850 670 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 CCNE1P24864 410 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
CD9-212ENST00000610354 ATICP31939 592 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 EPHA5P54756 1037 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 BIRC3Q13489 604 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 TRPC3Q13507 836 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 NCOA4Q13772 614 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 FAM171BQ6P995 826 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 TMC8Q8IU68 726 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 FGF13Q92913 245 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 RPP25Q9BUL9 199 aaKnown RBP13.66□□□□□ -0.22
CD9-212ENST00000610354 VRTNQ9H8Y1 702 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 KCNK12Q9HB15 430 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 ZNF334Q9HCZ1 680 aaPredicted RBP13.66□□□□□ -0.22
CD9-212ENST00000610354 CRTAC1Q9NQ79 661 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.66□□□□□ -0.22
CD9-212ENST00000610354 GTF3C4Q9UKN8 822 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
CD9-212ENST00000610354 ANHXE9PGG2 379 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 CETN3O15182 167 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 GPR37L1O60883 481 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 PHACTR2O75167 634 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 TACC1O75410 805 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 PDGFRBP09619 1106 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 GJA1P17302 382 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 GCLMP48507 274 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 LHX1P48742 406 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 GPR15P49685 360 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 CDH8P55286 799 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 MYL7Q01449 175 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 ENPEPQ07075 957 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 HTR4Q13639 388 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 TTI2Q6NXR4 508 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 INTS8Q75QN2 995 aaKnown RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 NPAS3Q8IXF0 933 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 DCP1BQ8IZD4 617 aaKnown RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 TAS1R2Q8TE23 839 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 DHTKD1Q96HY7 919 aaPredicted RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 ZNF512Q96ME7 567 aaPredicted RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 MMS19Q96T76 1030 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 LRFN3Q9BTN0 628 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 MKNK1Q9BUB5 465 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 SMYD3Q9H7B4 428 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 APOBEC3GQ9HC16 384 aaKnown RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 KIAA1468Q9P260 1216 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 HSFX1Q9UBD0 423 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms