RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 HAPLN1P10915 354 aaPredicted RBP17.25■□□□□ 0.35
SGMS1-209ENST00000609445 GARTP22102 1010 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 SOX9P48436 509 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 MTAPQ13126 283 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 ZNF528Q3MIS6 628 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 FOXD4L5Q5VV16 416 aaPredicted RBP17.25■□□□□ 0.35
SGMS1-209ENST00000609445 ITIH5Q86UX2 942 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 STKLD1Q8NE28 680 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 TTC8Q8TAM2 541 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 FOXD4L4Q8WXT5 416 aaPredicted RBP17.25■□□□□ 0.35
SGMS1-209ENST00000609445 FAM3CQ92520 227 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 E2F7Q96AV8 911 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 IL21Q9HBE4 155 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 PDE11AQ9HCR9 933 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 L1RE1Q9UN81 338 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 SPTLC2O15270 562 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 EXTL3O43909 919 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 KINO60870 393 aaKnown RBP17.24■□□□□ 0.35
SGMS1-209ENST00000609445 LDHAP00338 332 aaKnown RBP17.24■□□□□ 0.35
SGMS1-209ENST00000609445 CCNE1P24864 410 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 GPR15P49685 360 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 FCHO2Q0JRZ9 810 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 BFSP1Q12934 665 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 ALCAMQ13740 583 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 VEPH1Q14D04 833 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 E2F4Q16254 413 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 ARHGAP15Q53QZ3 475 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 LMBRD2Q68DH5 695 aaPredicted RBP17.24■□□□□ 0.35
SGMS1-209ENST00000609445 CCDC65Q8IXS2 484 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 PDCL2Q8N4E4 241 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 SUMF1Q8NBK3 374 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 CXorf38Q8TB03 319 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 ZFYVE19Q96K21 471 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 HINFPQ9BQA5 517 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 SMG9Q9H0W8 520 aaKnown RBP17.24■□□□□ 0.35
SGMS1-209ENST00000609445 CHRDQ9H2X0 955 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 LMAN1LQ9HAT1 526 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 DMXL1Q9Y485 3027 aa17.24■□□□□ 0.35
SGMS1-209ENST00000609445 SLC38A8A6NNN8 435 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 DPYSL4O14531 572 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 CHADO15335 359 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 FGF19O95750 216 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 ACAT1P24752 427 aaKnown RBP17.23■□□□□ 0.35
SGMS1-209ENST00000609445 PNPLA4P41247 253 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 CCDC142Q17RM4 750 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 OSTM1Q86WC4 334 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 KIAA2013Q8IYS2 634 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 DCP1BQ8IZD4 617 aaKnown RBP17.23■□□□□ 0.35
SGMS1-209ENST00000609445 CSGALNACT2Q8N6G5 542 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 SPPL2BQ8TCT7 592 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 CSGALNACT1Q8TDX6 532 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 C2orf15Q8WU43 125 aaKnown RBP17.23■□□□□ 0.35
SGMS1-209ENST00000609445 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
SGMS1-209ENST00000609445 DHX58Q96C10 678 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 MTMR12Q9C0I1 747 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 PRMT8Q9NR22 394 aaPredicted RBP17.23■□□□□ 0.35
SGMS1-209ENST00000609445 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
SGMS1-209ENST00000609445 PTPRJQ12913 1337 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 CACNA1AO00555 2505 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 HCRTO43612 131 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 HUS1O60921 280 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 KRT19P08727 400 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 CDC25CP30307 473 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 HOXD13P35453 343 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 KPNA1P52294 538 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-209ENST00000609445 TSPY1Q01534 308 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 SMARCB1Q12824 385 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 TAF12Q16514 161 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 FOXD4L6Q3SYB3 417 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-209ENST00000609445 SDHAF4Q5VUM1 108 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 FOXD4L3Q6VB84 417 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-209ENST00000609445 TMEM150AQ86TG1 271 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 GPD1LQ8N335 351 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 LRRC52Q8N7C0 313 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 ZBTB44Q8NCP5 570 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 ATRIPQ8WXE1 791 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 ZNF396Q96N95 335 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-209ENST00000609445 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 TMEM206Q9H813 350 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 KBTBD4Q9NVX7 518 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 ZSCAN32Q9NX65 697 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 ITGA11Q9UKX5 1188 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 PCDHB5Q9Y5E4 795 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 PCDHGA2Q9Y5H1 932 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 DCHS1Q96JQ0 3298 aa17.22■□□□□ 0.35
SGMS1-209ENST00000609445 PPP6R2O75170 966 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 PRPF40AO75400 957 aaKnown RBP17.21■□□□□ 0.35
SGMS1-209ENST00000609445 F11P03951 625 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 TMEM191BP0C7N4 346 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 CHRNB1P11230 501 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 HMGA1P17096 107 aaKnown RBP17.21■□□□□ 0.35
SGMS1-209ENST00000609445 ID4P47928 161 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 TNK2Q07912 1038 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 ARHGAP29Q52LW3 1261 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 WDR44Q5JSH3 913 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 TXNDC11Q6PKC3 985 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 SHC4Q6S5L8 630 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms