RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 PSMD6Q15008 389 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 SF3B4Q15427 424 aaKnown RBP eCLIP13.2□□□□□ -0.35e-10■□□□□ 9.4
CTCFL-218ENST00000608440 ERFEQ4G0M1 354 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 METTL24Q5JXM2 366 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 LPCAT2Q7L5N7 544 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 CPNE9Q8IYJ1 553 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 SACM1LQ9NTJ5 587 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 DNAJB4Q9UDY4 337 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 LGALS13Q9UHV8 139 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
CTCFL-218ENST00000608440 NOTOA8MTQ0 251 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 A8MU76 341 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 TP73O15350 636 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 TIMM44O43615 452 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ITM2AO43736 263 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SORBS2O94875 1100 aaKnown RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ZBTB11O95625 1053 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 RFC4P35249 363 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 NR1D2Q14995 579 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ZBTB46Q86UZ6 589 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 TRABD2AQ86V40 505 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 TTC30AQ86WT1 665 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 MAML1Q92585 1016 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 CCDC124Q96CT7 223 aaKnown RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ANKRD36BP1Q96IX9 119 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 CCDC77Q9BR77 488 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 CCSER1Q9C0I3 900 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 MEI4A8MW99 385 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SMIM22K7EJ46 135 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 TBC1D12O60347 775 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 FKBP6O75344 327 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 APOEP02649 317 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 THRAP10827 490 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 FDFT1P37268 417 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 CDK16Q00536 496 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 LRRC63Q05C16 580 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ZBTB17Q13105 803 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 CYFIP1Q7L576 1253 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SKA1Q96BD8 255 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ARHGEF26Q96DR7 871 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ITPKCQ96DU7 683 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SEPT11Q9NVA2 429 aaKnown RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 CHORDC1Q9UHD1 332 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 NID2Q14112 1375 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 MYH3P11055 1940 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 A0A1W2PPM1 405 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 XPO1O14980 1071 aaKnown RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ADRA1DP25100 572 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 GNA11P29992 359 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 PPARGP37231 505 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ITGA8P53708 1063 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 KRT17Q04695 432 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 RABGAP1LQ5R372 815 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 GJB7Q6PEY0 223 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 VPS36Q86VN1 386 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 GLYCTKQ8IVS8 523 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 C1orf54Q8WWF1 131 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 SLC7A5P2Q9GIP4 190 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 VTA1Q9NP79 307 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
CTCFL-218ENST00000608440 ACTL7BQ9Y614 415 aa13.19□□□□□ -0.3
CTCFL-218ENST00000608440 EXOC1LA0A1B0GW35 172 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 MYMKA6NI61 221 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 KDM1AO60341 852 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 UCHL3P15374 230 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 EPHB1P54762 984 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 ARL4CP56559 192 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTCFL-218ENST00000608440 FKBP3Q00688 224 aaKnown RBP13.18□□□□□ -0.3
CTCFL-218ENST00000608440 AMPD3Q01432 767 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 E2F2Q14209 437 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 PDK1Q15118 436 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 SPOPLQ6IQ16 392 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 MIER3Q7Z3K6 550 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 GUF1Q8N442 669 aaKnown RBP13.18□□□□□ -0.3
CTCFL-218ENST00000608440 GPAMQ9HCL2 828 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 A0A0A6YYK5 440 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-218ENST00000608440 ANKRD34BA5PLL1 514 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 TMX2-CTNND1H3BSU7 103 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 MCF2LO15068 1137 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 FBXO21O94952 628 aa13.18□□□□□ -0.3
CTCFL-218ENST00000608440 TNFAIP8O95379 198 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms