RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 SLC4A11Q8NBS3 891 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 ZNF606Q8WXB4 792 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 RABGGTAQ92696 567 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 RNPC3Q96LT9 517 aaKnown RBP17.16■□□□□ 0.34
CNN2-212ENST00000607102 TSGA10Q9BZW7 698 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 ZNF518BQ9C0D4 1074 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 ELOVL4Q9GZR5 314 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 DDX43Q9NXZ2 648 aaKnown RBP17.16■□□□□ 0.34
CNN2-212ENST00000607102 SPG21Q9NZD8 308 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 HESX1Q9UBX0 185 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 PCDHGC3Q9UN70 934 aa17.16■□□□□ 0.34
CNN2-212ENST00000607102 B4GALT3O60512 393 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 SLC8A3P57103 927 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 SNX16P57768 344 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 CNGA2Q16280 664 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 RASIP1Q5U651 963 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 TAF3Q5VWG9 929 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 ZNF280DQ6N043 979 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 ALKBH5Q6P6C2 394 aaKnown RBP17.15■□□□□ 0.34
CNN2-212ENST00000607102 GPIHBP1Q8IV16 184 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 GLYCTKQ8IVS8 523 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 B3GALNT2Q8NCR0 500 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 TMEM35BQ8NCS4 154 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 WHAMMQ8TF30 809 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 TRIM11Q96F44 468 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 NOX5Q96PH1 765 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 ACBD6Q9BR61 282 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 SYT11Q9BT88 431 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 CXXC1Q9P0U4 656 aaPredicted RBP17.15■□□□□ 0.34
CNN2-212ENST00000607102 INTUQ9ULD6 942 aa17.15■□□□□ 0.34
CNN2-212ENST00000607102 MRPL42Q9Y6G3 142 aaKnown RBP17.15■□□□□ 0.34
CNN2-212ENST00000607102 MMEP08473 750 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 BRD2P25440 801 aaKnown RBP17.14■□□□□ 0.33
CNN2-212ENST00000607102 MAGEA1P43355 309 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 FMO1Q01740 532 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 KRT17Q04695 432 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 GFPT1Q06210 699 aaPredicted RBP17.14■□□□□ 0.33
CNN2-212ENST00000607102 CCDC122Q5T0U0 273 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 FAM171A1Q5VUB5 890 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 ARHGAP17Q68EM7 881 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 CD300LGQ6UXG3 332 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 ANKS3Q6ZW76 656 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 ACOT1Q86TX2 421 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 COLGALT1Q8NBJ5 622 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 SLC20A1Q8WUM9 679 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 DDX1Q92499 740 aaKnown RBP17.14■□□□□ 0.33
CNN2-212ENST00000607102 IGSF21Q96ID5 467 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 MIS12Q9H081 205 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 LHX5Q9H2C1 402 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 SPTLC3Q9NUV7 552 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 MARCH5Q9NX47 278 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 NAGPAQ9UK23 515 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 ADGRG1Q9Y653 693 aa17.14■□□□□ 0.33
CNN2-212ENST00000607102 A0A087X0T9 212 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 OR6C75A6NL08 312 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 DDX3XO00571 662 aaKnown RBP eCLIP17.13■□□□□ 0.333e-15■■■■■ 28.3
CNN2-212ENST00000607102 RTN2O75298 545 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 OAZ2O95190 189 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 ITGB1P05556 798 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 PDGFRBP09619 1106 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 FAM228BP0C875 321 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 PTPN1P18031 435 aaKnown RBP17.13■□□□□ 0.33
CNN2-212ENST00000607102 FGFR3P22607 806 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 NSFP46459 744 aaKnown RBP17.13■□□□□ 0.33
CNN2-212ENST00000607102 MTF1Q14872 753 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 CLEC16AQ2KHT3 1053 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 USP41Q3LFD5 358 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 KIAA1841Q6NSI8 718 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 TOGARAM2Q6ZUX3 1019 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 DCP1BQ8IZD4 617 aaKnown RBP17.13■□□□□ 0.33
CNN2-212ENST00000607102 SLC39A11Q8N1S5 342 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 SLC30A5Q8TAD4 765 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 SP7Q8TDD2 431 aaPredicted RBP17.13■□□□□ 0.33
CNN2-212ENST00000607102 TWNKQ96RR1 684 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 TTPALQ9BTX7 342 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 UBE2OQ9C0C9 1292 aaKnown RBP17.13■□□□□ 0.33
CNN2-212ENST00000607102 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 HMGXB4Q9UGU5 601 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 PYCARDQ9ULZ3 195 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.13■□□□□ 0.33
CNN2-212ENST00000607102 SSX2IPQ9Y2D8 614 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 PPP2R2CQ9Y2T4 447 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 PCDHA13Q9Y5I0 950 aa17.13■□□□□ 0.33
CNN2-212ENST00000607102 TSC2P49815 1807 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 PTPRSQ13332 1948 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 I3L4J1 428 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 O00370 1275 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 KRT86O43790 486 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 H2AFZP0C0S5 128 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 SETSIPP0DME0 302 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 CHRNB2P17787 502 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 TKTP29401 623 aaKnown RBP17.12■□□□□ 0.33
CNN2-212ENST00000607102 VAV2P52735 878 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 BCAT1P54687 386 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 CREMQ03060 361 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 SMARCB1Q12824 385 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
CNN2-212ENST00000607102 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms