RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 C15orf41Q9Y2V0 281 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PIK3C2GO75747 1445 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 SH3TC1Q8TE82 1336 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TRAV6A0A075B6T7 132 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TTC34A8MYJ7 566 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PLD2O14939 933 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 WDR46O15213 610 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 RFPL3O75679 317 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC22A3O75751 556 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CAPNS1P04632 268 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 HEXBP07686 556 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 SOX6P35712 828 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PRELPP51888 382 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CDK17Q00537 523 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CLN3Q13286 438 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 SNW1Q13573 536 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 USP39Q53GS9 565 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 DCAF17Q5H9S7 520 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TPGS2Q68CL5 300 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TMEM53Q6P2H8 277 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CYB5D1Q6P9G0 228 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TPTE2Q6XPS3 522 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF574Q6ZN55 896 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CYP2U1Q7Z449 544 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ZSCAN1Q8NBB4 408 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 NSMCE1Q8WV22 266 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF566Q969W8 418 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 SCLYQ96I15 445 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ANKRD27Q96NW4 1050 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 AGXT2Q9BYV1 514 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 RNF38Q9H0F5 515 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 NSRP1Q9H0G5 558 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 C2orf40Q9H1Z8 148 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 GLRX2Q9NS18 164 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PCMTD2Q9NV79 361 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ANO10Q9NW15 660 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 NSMCE4AQ9NXX6 385 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TLR7Q9NYK1 1049 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 HSPBP1Q9NZL4 362 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 DNMT3LQ9UJW3 386 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 BCL9O00512 1426 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ADGRL3Q9HAR2 1447 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ANKRD50Q9ULJ7 1429 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 RTL1A6NKG5 1358 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 BLACEA4D250 179 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 HTR3EA5X5Y0 456 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 USP27XA6NNY8 438 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 H0YAE9 185 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 BIRC5O15392 142 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 USP1O94782 785 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 CSTBP04080 98 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 PSAPP07602 524 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 MYCLP12524 364 aaPredicted RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 VAV1P15498 845 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ATP5DP30049 168 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 CIITAP33076 1130 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 EPS15P42566 896 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 PTGIRP43119 386 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 GSTM4Q03013 218 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 SULT2A1Q06520 285 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ACAP2Q15057 778 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 DHCR24Q15392 516 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 BCL2A1Q16548 175 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 CEP55Q53EZ4 464 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 C4orf17Q53FE4 359 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 TMEM214Q6NUQ4 689 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 MAMDC2Q7Z304 686 aaPredicted RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 SESTD1Q86VW0 696 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 LURAP1LQ8IV03 231 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 LRRC8AQ8IWT6 810 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 C10orf53Q8N6V4 93 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 GDAP1Q8TB36 358 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 METTL21AQ8WXB1 218 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 BSNDQ8WZ55 320 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ABHD8Q96I13 439 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 SUCLG2Q96I99 432 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 C19orf43Q9BQ61 176 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 NDST4Q9H3R1 872 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 SYNDIG1Q9H7V2 258 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 PDE7BQ9NP56 450 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 RPRD1BQ9NQG5 326 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 SERPINB13Q9UIV8 391 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 KCNH4Q9UQ05 1017 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 R3HDM2Q9Y2K5 976 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ADGRL2O95490 1459 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 DAPK1P53355 1430 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 PEAK1Q9H792 1746 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 A0A087X0M5 115 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 A0A1B0GX30 115 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 A0A1W2PQH9 124 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 DDX39AO00148 427 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ZBED1O96006 694 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 LTA4HP09960 611 aaKnown RBP5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 IL2P60568 153 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 COG7P83436 770 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ARHGAP8P85298 464 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 DGKZQ13574 1117 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 ITGA7Q13683 1181 aa5.31□□□□□ -1.56
SPTBN1-206ENST00000602898 DLGAP5Q15398 846 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms