RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 CYP27A1Q02318 531 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 GFPT1Q06210 699 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-207ENST00000602841 SLC18A3Q16572 532 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 TMEM270Q6UE05 265 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 TMCO2Q7Z6W1 182 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-207ENST00000602841 NPAS4Q8IUM7 802 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 HACE1Q8IYU2 909 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 GJD3Q8N144 294 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 RBBP8NLQ8NC74 664 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-207ENST00000602841 RNF169Q8NCN4 708 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 TRIM44Q96DX7 344 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-207ENST00000602841 LPIN3Q9BQK8 851 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 FAM124BQ9H5Z6 455 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-207ENST00000602841 IL23AQ9NPF7 189 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 NXF1Q9UBU9 619 aaKnown RBP11.5□□□□□ -0.57
SCNM1-207ENST00000602841 ADAMTS1Q9UHI8 967 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 SALL4Q9UJQ4 1053 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 PPP2R2CQ9Y2T4 447 aa11.5□□□□□ -0.57
SCNM1-207ENST00000602841 BZW2Q9Y6E2 419 aaKnown RBP11.5□□□□□ -0.57
SCNM1-207ENST00000602841 ZFHX4Q86UP3 3567 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 CASTOR2A6NHX0 329 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 TMEM189-UBE2V1I3L0A0 370 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 PJA2O43164 708 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 XPOTO43592 962 aaKnown RBP11.49□□□□□ -0.57
SCNM1-207ENST00000602841 MMEP08473 750 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 UNGP13051 313 aaPredicted RBP11.49□□□□□ -0.57
SCNM1-207ENST00000602841 ALADP13716 330 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 BRCC3P46736 316 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 TAF6P49848 677 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 NDST1P52848 882 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 RABGGTBP53611 331 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 WDR5P61964 334 aaKnown RBP11.49□□□□□ -0.57
SCNM1-207ENST00000602841 CDR2Q01850 454 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 PPIGQ13427 754 aaKnown RBP eCLIP11.49□□□□□ -0.574e-6■■□□□ 13.5
SCNM1-207ENST00000602841 IKBKEQ14164 716 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 BMS1Q14692 1282 aaKnown RBP11.49□□□□□ -0.57
SCNM1-207ENST00000602841 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 DPH6Q7L8W6 267 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 GLYCTKQ8IVS8 523 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 CRYBG2Q8N1P7 616 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 PDCL2Q8N4E4 241 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 BCL7CQ8WUZ0 217 aaPredicted RBP11.49□□□□□ -0.57
SCNM1-207ENST00000602841 PPP1R13BQ96KQ4 1090 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 PACSIN1Q9BY11 444 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 RRAGDQ9NQL2 400 aaPredicted RBP11.49□□□□□ -0.57
SCNM1-207ENST00000602841 MARCH5Q9NX47 278 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 NAGPAQ9UK23 515 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 PCDHB4Q9Y5E5 795 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 SNX9Q9Y5X1 595 aa11.49□□□□□ -0.57
SCNM1-207ENST00000602841 GABBR2O75899 941 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 KRT37O76014 449 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 KIF4AO95239 1232 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 CYP11A1P05108 521 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PFKMP08237 780 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 CD58P19256 250 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 WARSP23381 471 aaKnown RBP11.48□□□□□ -0.57
SCNM1-207ENST00000602841 CDH5P33151 784 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PNPLA4P41247 253 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 SLC11A1P49279 550 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PTP4A2Q12974 167 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PKDCCQ504Y2 493 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PPP2R2DQ66LE6 453 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 GLB1LQ6UWU2 654 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PAQR9Q6ZVX9 377 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 RNF168Q8IYW5 571 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-207ENST00000602841 RPUSD2Q8IZ73 545 aaKnown RBP11.48□□□□□ -0.57
SCNM1-207ENST00000602841 TMEM199Q8N511 208 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 TOP6BLQ8N6T0 577 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 ZNF606Q8WXB4 792 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
SCNM1-207ENST00000602841 TMEM176AQ96HP8 235 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 SENP8Q96LD8 212 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 CCDC42Q96M95 316 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 UROC1Q96N76 676 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PKMYT1Q99640 499 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 DPEP3Q9H4B8 488 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
SCNM1-207ENST00000602841 TRIM10Q9UDY6 481 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 CYTH4Q9UIA0 394 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 BARX2Q9UMQ3 279 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-207ENST00000602841 INPP5FQ9Y2H2 1132 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PCDHB7Q9Y5E2 793 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 PCDHA13Q9Y5I0 950 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 DUSP10Q9Y6W6 482 aa11.48□□□□□ -0.57
SCNM1-207ENST00000602841 EPOPA6NHQ4 379 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 NRP1O14786 923 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 GALTP07902 379 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 PAEPP09466 180 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 MYO1EQ12965 1108 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 ORC1Q13415 861 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 MRPL58Q14197 206 aaKnown RBP11.47□□□□□ -0.57
SCNM1-207ENST00000602841 CCDC142Q17RM4 750 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 ZNF394Q53GI3 561 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 TAF3Q5VWG9 929 aa11.47□□□□□ -0.57
SCNM1-207ENST00000602841 WSCD1Q658N2 575 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms