RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ACCSQ96QU6 501 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 FAM213AQ9BRX8 229 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 TASP1Q9H6P5 420 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 IL21Q9HBE4 155 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 RBM12Q9NTZ6 932 aaKnown RBP14.2□□□□□ -0.14
RPS28-204ENST00000602140 OBP2AQ9NY56 170 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 ABI2Q9NYB9 513 aaPredicted RBP14.2□□□□□ -0.14
RPS28-204ENST00000602140 DLL3Q9NYJ7 618 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 GTSE1Q9NYZ3 720 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 EXOC7Q9UPT5 735 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 F5P12259 2224 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 CACNA1AO00555 2505 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 SCN1AP35498 2009 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 MYBPHLA2RUH7 354 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 GCNT3O95395 438 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 PRAMEF12O95522 483 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 HAPLN1P10915 354 aaPredicted RBP14.19□□□□□ -0.14
RPS28-204ENST00000602140 GAP43P17677 238 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 CDC25CP30307 473 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 CTHP32929 405 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 WNT7BP56706 349 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 TFAMQ00059 246 aaKnown RBP14.19□□□□□ -0.14
RPS28-204ENST00000602140 SMARCB1Q12824 385 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 RESTQ13127 1097 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 LRRC32Q14392 662 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 RSPO4Q2I0M5 234 aaPredicted RBP14.19□□□□□ -0.14
RPS28-204ENST00000602140 L1TD1Q5T7N2 865 aaKnown RBP14.19□□□□□ -0.14
RPS28-204ENST00000602140 TXNDC11Q6PKC3 985 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 RALGPS2Q86X27 583 aaPredicted RBP14.19□□□□□ -0.14
RPS28-204ENST00000602140 NT5DC4Q86YG4 428 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 DCP1BQ8IZD4 617 aaKnown RBP14.19□□□□□ -0.14
RPS28-204ENST00000602140 GPR161Q8N6U8 529 aaKnown RBP14.19□□□□□ -0.14
RPS28-204ENST00000602140 ZSWIM2Q8NEG5 633 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 BPIFB1Q8TDL5 484 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 SAAL1Q96ER3 474 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 ZNF560Q96MR9 790 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 GCNAQ96QF7 691 aa14.19□□□□□ -0.14
RPS28-204ENST00000602140 MED19A0JLT2 244 aaPredicted RBP14.18□□□□□ -0.14
RPS28-204ENST00000602140 IDEP14735 1019 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 SYT1P21579 422 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 WEE1P30291 646 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 POLR2BP30876 1174 aaKnown RBP14.18□□□□□ -0.14
RPS28-204ENST00000602140 PNPLA4P41247 253 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 CASP5P51878 434 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 TNK2Q07912 1038 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 PON2Q15165 354 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 LPAL2Q16609 132 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 WDR44Q5JSH3 913 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 Q6ZS52 159 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 SYCP3Q8IZU3 236 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 SPEM1Q8N4L4 309 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 SLC46A2Q9BY10 475 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 PANK2Q9BZ23 570 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 SMG9Q9H0W8 520 aaKnown RBP14.18□□□□□ -0.14
RPS28-204ENST00000602140 OLFML3Q9NRN5 406 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 TMLHEQ9NVH6 421 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 GMEB2Q9UKD1 530 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 RAB23Q9ULC3 237 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 AGAP1Q9UPQ3 857 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 PCDHB5Q9Y5E4 795 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
RPS28-204ENST00000602140 NUP210Q8TEM1 1887 aaPredicted RBP14.17□□□□□ -0.14
RPS28-204ENST00000602140 GOLGA8IPA6NC78 632 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 GOLGA8JA6NMD2 632 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
RPS28-204ENST00000602140 ITGB3P05106 788 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 STAT6P42226 847 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 PLCB2Q00722 1185 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 TSPY1Q01534 308 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 CCDC73Q6ZRK6 1079 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 BRSK2Q8IWQ3 736 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 CMTM8Q8IZV2 173 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 PDCL2Q8N4E4 241 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 CELF5Q8N6W0 485 aaKnown RBP14.17□□□□□ -0.14
RPS28-204ENST00000602140 C1orf127Q8N9H9 656 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 NOC3LQ8WTT2 800 aaKnown RBP14.17□□□□□ -0.14
RPS28-204ENST00000602140 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
RPS28-204ENST00000602140 PI4K2AQ9BTU6 479 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 FGFBP2Q9BYJ0 223 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 THG1LQ9NWX6 298 aaKnown RBP14.17□□□□□ -0.14
RPS28-204ENST00000602140 RBAKQ9NYW8 714 aaPredicted RBP14.17□□□□□ -0.14
RPS28-204ENST00000602140 USP18Q9UMW8 372 aa14.17□□□□□ -0.14
RPS28-204ENST00000602140 TCHHQ07283 1943 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 A0A087X0B3 334 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 CHURC1-FNTBB4DL54 471 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 HUS1O60921 280 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 PRPF40AO75400 957 aaKnown RBP14.16□□□□□ -0.14
RPS28-204ENST00000602140 F11P03951 625 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 HMGA1P17096 107 aaKnown RBP14.16□□□□□ -0.14
RPS28-204ENST00000602140 GARTP22102 1010 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 TGM1P22735 817 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 FNTBP49356 437 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 GPR15P49685 360 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 NLRP12P59046 1061 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 DMWDQ09019 674 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 BFSP1Q12934 665 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 ALCAMQ13740 583 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
RPS28-204ENST00000602140 DGKKQ5KSL6 1271 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 SCARA3Q6AZY7 606 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms