RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FAM189A1O60320 539 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 BANF1O75531 89 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 SLC8A1P32418 973 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 ALDH5A1P51649 535 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 VCPP55072 806 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 IL9RQ01113 521 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 PKN2Q16513 984 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 TFAP2BQ92481 460 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 THOC1Q96FV9 657 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 PITPNM3Q9BZ71 974 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 TMEM134Q9H6X4 195 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 SGK1O00141 431 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 CDKN2BP42772 138 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 RNASEH2BQ5TBB1 312 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 LRRC38Q5VT99 294 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 CEP128Q6ZU80 1094 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 ECHDC2Q86YB7 292 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 C4orf33Q8N1A6 199 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 ANKLE1Q8NAG6 615 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 TMEM35BQ8NCS4 154 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 KLHL29Q96CT2 875 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 C10orf88Q9H8K7 445 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 KLHL14Q9P2G3 628 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 MCM8Q9UJA3 840 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 GJA3Q9Y6H8 435 aa21.33■■□□□ 1.01
SHKBP1-225ENST00000600733 ASMTLO95671 621 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 LSM8O95777 96 aaKnown RBP21.32■■□□□ 1
SHKBP1-225ENST00000600733 UBA1P22314 1058 aaKnown RBP21.32■■□□□ 1
SHKBP1-225ENST00000600733 DNAJC3Q13217 504 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 MORF4L2Q15014 288 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 PPP1R15BQ5SWA1 713 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 WDR49Q8IV35 697 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 PRPF31Q8WWY3 499 aaKnown RBP21.32■■□□□ 1
SHKBP1-225ENST00000600733 TTC25Q96NG3 672 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 TRABDQ9H4I3 376 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 IGKV6D-21A0A0A0MT36 114 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 KRT16P08779 473 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 KRT15P19012 456 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 ICAM3P32942 547 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 DYNLT1P63172 113 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 ZNF268Q14587 947 aaPredicted RBP21.32■■□□□ 1
SHKBP1-225ENST00000600733 TARBP2Q15633 366 aaKnown RBP21.32■■□□□ 1
SHKBP1-225ENST00000600733 SMTNL2Q2TAL5 461 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 PLCD4Q9BRC7 762 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 NIF3L1Q9GZT8 377 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 PIM2Q9P1W9 311 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 GRID1Q9ULK0 1009 aa21.32■■□□□ 1
SHKBP1-225ENST00000600733 DRG1Q9Y295 367 aaKnown RBP21.32■■□□□ 1
SHKBP1-225ENST00000600733 MSCO60682 206 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 EZRP15311 586 aaKnown RBP21.31■■□□□ 1
SHKBP1-225ENST00000600733 RXRBP28702 533 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 GAD2Q05329 585 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 PDIA2Q13087 525 aaKnown RBP21.31■■□□□ 1
SHKBP1-225ENST00000600733 RIPK1Q13546 671 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 NEDD9Q14511 834 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 CCDC142Q17RM4 750 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 ERICH1Q86X53 443 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 TJP2Q9UDY2 1190 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 RPS12P25398 132 aaKnown RBP21.31■■□□□ 1
SHKBP1-225ENST00000600733 RFC5P40937 340 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 PIGHQ14442 188 aaPredicted RBP21.31■■□□□ 1
SHKBP1-225ENST00000600733 TDRPQ86YL5 185 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 ANKMY2Q8IV38 441 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 DENND1AQ8TEH3 1009 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 PRCCQ92733 491 aaPredicted RBP21.31■■□□□ 1
SHKBP1-225ENST00000600733 NKD2Q969F2 451 aaPredicted RBP21.31■■□□□ 1
SHKBP1-225ENST00000600733 MYCBPQ99417 103 aaPredicted RBP21.31■■□□□ 1
SHKBP1-225ENST00000600733 SLCO1B3Q9NPD5 702 aa21.31■■□□□ 1
SHKBP1-225ENST00000600733 A8MUI8 341 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 C19orf81C9J6K1 198 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 NFKBIEO00221 500 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 FARP2O94887 1054 aaPredicted RBP21.3■■□□□ 1
SHKBP1-225ENST00000600733 ITGAVP06756 1048 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 SRGAP2CP0DJJ0 459 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 RPA3P35244 121 aaPredicted RBP21.3■■□□□ 1
SHKBP1-225ENST00000600733 NR1H3Q13133 447 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 KCNT1Q5JUK3 1230 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 RNF43Q68DV7 783 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 ZPBP2Q6X784 338 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 L3MBTL1Q9Y468 752 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 ALOX15BO15296 676 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 TOM1L1O75674 476 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 PIAS1O75925 651 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 ITGBL1O95965 494 aaPredicted RBP21.3■■□□□ 1
SHKBP1-225ENST00000600733 PTPN7P35236 360 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 RFC1P35251 1148 aaPredicted RBP21.3■■□□□ 1
SHKBP1-225ENST00000600733 STAT5BP51692 787 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 TFAMQ00059 246 aaKnown RBP21.3■■□□□ 1
SHKBP1-225ENST00000600733 ZWILCHQ9H900 591 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 PCDH9Q9HC56 1237 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 STK38LQ9Y2H1 464 aa21.3■■□□□ 1
SHKBP1-225ENST00000600733 A0A1W2PPM1 405 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 C3orf70A6NLC5 250 aaPredicted RBP21.29■■□□□ 1
SHKBP1-225ENST00000600733 PRPF4O43172 522 aaKnown RBP eCLIP21.29■■□□□ 1
SHKBP1-225ENST00000600733 GDF10P55107 478 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 MTM1Q13496 603 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 TRPC3Q13507 836 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 DUOXA2Q1HG44 320 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 ACCSLQ4AC99 568 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 DENND1BQ6P3S1 775 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms