RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 LNX1Q8TBB1 728 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-205ENST00000600117 AUTS2Q8WXX7 1259 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 CRACR2AQ9BSW2 395 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 IMPG2Q9BZV3 1241 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 INTS2Q9H0H0 1204 aaKnown RBP20.19■□□□□ 0.82
CCDC9-205ENST00000600117 NXF1Q9UBU9 619 aaKnown RBP20.19■□□□□ 0.82
CCDC9-205ENST00000600117 PROB1E7EW31 1015 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 HUS1O60921 280 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 GLP2RO95838 553 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 URODP06132 367 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 ASPAP45381 313 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 NRIP1P48552 1158 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 NUBP1P53384 320 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 TNNC1P63316 161 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 KCNMA1Q12791 1236 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 CETN1Q12798 172 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 PLPP4Q5VZY2 271 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 DPY19L2P1Q6NXN4 242 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 PRSS55Q6UWB4 352 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-205ENST00000600117 GBP6Q6ZN66 633 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 DPH6Q7L8W6 267 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 PDCL2Q8N4E4 241 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 APPL2Q8NEU8 664 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 RIN2Q8WYP3 895 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-205ENST00000600117 TATDN2Q93075 761 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 BCO2Q9BYV7 579 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 NIF3L1Q9GZT8 377 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 SDCBP2Q9H190 292 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 SMYD3Q9H7B4 428 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 NGRNQ9NPE2 291 aaKnown RBP20.18■□□□□ 0.82
CCDC9-205ENST00000600117 ENTPD7Q9NQZ7 604 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 GCNT4Q9P109 453 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 BARX2Q9UMQ3 279 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-205ENST00000600117 IRAK3Q9Y616 596 aa20.18■□□□□ 0.82
CCDC9-205ENST00000600117 ARHGEF37A1IGU5 675 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 C2orf71A6NGG8 1288 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 PES1O00541 588 aaKnown RBP20.17■□□□□ 0.82
CCDC9-205ENST00000600117 C2CD2LO14523 706 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 TBC1D4O60343 1298 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 OAZ2O95190 189 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 CXCL14O95715 111 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 TPM2P07951 284 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 SLC9A1P19634 815 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 FANCCQ00597 558 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 SMC1AQ14683 1233 aaKnown RBP20.17■□□□□ 0.82
CCDC9-205ENST00000600117 WDR44Q5JSH3 913 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 PDE12Q6L8Q7 609 aaKnown RBP20.17■□□□□ 0.82
CCDC9-205ENST00000600117 KIAA1841Q6NSI8 718 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 OSTM1Q86WC4 334 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 MRPL43Q8N983 215 aaKnown RBP20.17■□□□□ 0.82
CCDC9-205ENST00000600117 CCDC150Q8NCX0 1101 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 KBTBD7Q8WVZ9 684 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 FAXDC2Q96IV6 333 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 NAP1L5Q96NT1 182 aaPredicted RBP20.17■□□□□ 0.82
CCDC9-205ENST00000600117 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 RXFP1Q9HBX9 757 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 RTN4Q9NQC3 1192 aaKnown RBP20.17■□□□□ 0.82
CCDC9-205ENST00000600117 MTRRQ9UBK8 725 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 DSEQ9UL01 958 aa20.17■□□□□ 0.82
CCDC9-205ENST00000600117 DMXL1Q9Y485 3027 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 A0A1B0GTH6 734 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 HIDE1A8MVS5 230 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 GABRDO14764 452 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 TACC1O75410 805 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 FAM163BP0C2L3 166 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 PON1P27169 355 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 LRMPQ12912 555 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 PSMD5Q16401 504 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 PTPN21Q16825 1174 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 EXOC3L4Q17RC7 722 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 OVOS1Q6IE37 1185 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 TRIM65Q6PJ69 517 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 RSPO2Q6UXX9 243 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-205ENST00000600117 SCARA5Q6ZMJ2 495 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 ANKS3Q6ZW76 656 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 ADGRF2Q8IZF7 708 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 TMEM86AQ8N2M4 240 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 SPATA18Q8TC71 538 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 MMS19Q96T76 1030 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 MRPL45Q9BRJ2 306 aaKnown RBP20.16■□□□□ 0.82
CCDC9-205ENST00000600117 SIX2Q9NPC8 291 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 MRPL17Q9NRX2 175 aaKnown RBP20.16■□□□□ 0.82
CCDC9-205ENST00000600117 SSX2IPQ9Y2D8 614 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 NME7Q9Y5B8 376 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 BACE2Q9Y5Z0 518 aa20.16■□□□□ 0.82
CCDC9-205ENST00000600117 H0Y858 1186 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 TEX33O43247 280 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 P4HA1P13674 534 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 WARSP23381 471 aaKnown RBP20.15■□□□□ 0.82
CCDC9-205ENST00000600117 RAP1GAPP47736 663 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 CDH8P55286 799 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 APBA1Q02410 837 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 YWHAHQ04917 246 aaPredicted RBP20.15■□□□□ 0.82
CCDC9-205ENST00000600117 FKBP15Q5T1M5 1219 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 PHLDB3Q6NSJ2 640 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 PDXDC1Q6P996 788 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 RBM23Q86U06 439 aaKnown RBP20.15■□□□□ 0.82
CCDC9-205ENST00000600117 ARHGEF19Q8IW93 802 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 MICAL1Q8TDZ2 1067 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms