RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 CACNA1BQ00975 2339 aa18.58■□□□□ 0.56
SMG9-210ENST00000600097 ACACBO00763 2458 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 CYB561D2O14569 222 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 BMP15O95972 392 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 ACOT2P49753 483 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 TNK2Q07912 1038 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 SRSF5Q13243 272 aaKnown RBP18.57■□□□□ 0.56
SMG9-210ENST00000600097 RABEP1Q15276 862 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 ADALQ6DHV7 355 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 WDR5BQ86VZ2 330 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 CMTM8Q8IZV2 173 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 RASSF8Q8NHQ8 419 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 RAD54LQ92698 747 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 FIZ1Q96SL8 496 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 PYM1Q9BRP8 204 aaKnown RBP18.57■□□□□ 0.56
SMG9-210ENST00000600097 SLC46A2Q9BY10 475 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 DPP3Q9NY33 737 aa18.57■□□□□ 0.56
SMG9-210ENST00000600097 CCDC163A0A0D9SF12 145 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 HAPLN1P10915 354 aaPredicted RBP18.56■□□□□ 0.56
SMG9-210ENST00000600097 PLCG1P19174 1290 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 GJB2P29033 226 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 LONP1P36776 959 aaKnown RBP18.56■□□□□ 0.56
SMG9-210ENST00000600097 MCM6Q14566 821 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 PPM1JQ5JR12 505 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 DCP1BQ8IZD4 617 aaKnown RBP18.56■□□□□ 0.56
SMG9-210ENST00000600097 FAM160A2Q8N612 972 aaPredicted RBP18.56■□□□□ 0.56
SMG9-210ENST00000600097 LRRC15Q8TF66 581 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
SMG9-210ENST00000600097 ST6GALNAC4Q9H4F1 302 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 AGO2Q9UKV8 859 aaKnown RBP18.56■□□□□ 0.56
SMG9-210ENST00000600097 STYXL1Q9Y6J8 313 aa18.56■□□□□ 0.56
SMG9-210ENST00000600097 NUP210Q8TEM1 1887 aaPredicted RBP18.55■□□□□ 0.56
SMG9-210ENST00000600097 SOBPA7XYQ1 873 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 ANKRD63C9JTQ0 380 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 ATG13O75143 517 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 DDX6P26196 483 aaKnown RBP eCLIP18.55■□□□□ 0.565e-9■■■■□ 20.6
SMG9-210ENST00000600097 NMT1P30419 496 aaKnown RBP18.55■□□□□ 0.56
SMG9-210ENST00000600097 AVPR1AP37288 418 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 AMPD2Q01433 879 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 SV2CQ496J9 727 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 WSCD1Q658N2 575 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 NT5DC4Q86YG4 428 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 GIPC2Q8TF65 315 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 LARP4BQ92615 738 aaKnown RBP18.55■□□□□ 0.56
SMG9-210ENST00000600097 LOXL4Q96JB6 756 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 TMX3Q96JJ7 454 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 FAM83CQ9BQN1 747 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 GKN1Q9NS71 199 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 C2orf42Q9NWW7 574 aa18.55■□□□□ 0.56
SMG9-210ENST00000600097 KPNA7A9QM74 516 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 GRSF1Q12849 480 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMG9-210ENST00000600097 BFSP1Q12934 665 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 RUNX3Q13761 415 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 KARSQ15046 597 aaKnown RBP18.54■□□□□ 0.56
SMG9-210ENST00000600097 POSTNQ15063 836 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 ZC2HC1CQ53FD0 456 aaPredicted RBP18.54■□□□□ 0.56
SMG9-210ENST00000600097 TMEM196Q5HYL7 178 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 LRRTM3Q86VH5 581 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 KRI1Q8N9T8 703 aaKnown RBP18.54■□□□□ 0.56
SMG9-210ENST00000600097 HVCN1Q96D96 273 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 ZNF560Q96MR9 790 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 SMG9Q9H0W8 520 aaKnown RBP18.54■□□□□ 0.56
SMG9-210ENST00000600097 KIF9Q9HAQ2 790 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 ABI2Q9NYB9 513 aaPredicted RBP18.54■□□□□ 0.56
SMG9-210ENST00000600097 PCDHB5Q9Y5E4 795 aa18.54■□□□□ 0.56
SMG9-210ENST00000600097 TRDMT1O14717 391 aaKnown RBP18.53■□□□□ 0.56
SMG9-210ENST00000600097 EXTL3O43909 919 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 IL18RAPO95256 599 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 DDIT3P35638 169 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 PNPLA4P41247 253 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 NLRP12P59046 1061 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 TSPY1Q01534 308 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 NFE2Q16621 373 aaPredicted RBP18.53■□□□□ 0.56
SMG9-210ENST00000600097 MAB21L3Q8N8X9 362 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 GAB3Q8WWW8 586 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 MRPS31Q92665 395 aaKnown RBP18.53■□□□□ 0.56
SMG9-210ENST00000600097 TDP1Q9NUW8 608 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 SLC8A2Q9UPR5 921 aa18.53■□□□□ 0.56
SMG9-210ENST00000600097 TISP43B9A030 160 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 GDF9O60383 454 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 RPP40O75818 363 aaKnown RBP18.52■□□□□ 0.56
SMG9-210ENST00000600097 F11P03951 625 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 CSH1P0DML2 217 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 CSH2P0DML3 217 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 HMGA1P17096 107 aaKnown RBP18.52■□□□□ 0.56
SMG9-210ENST00000600097 CDR1P51861 262 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 CC2D1AQ6P1N0 951 aaPredicted RBP18.52■□□□□ 0.56
SMG9-210ENST00000600097 CRELD2Q6UXH1 353 aaPredicted RBP18.52■□□□□ 0.56
SMG9-210ENST00000600097 ZNF720Q7Z2F6 126 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 CACNA2D4Q7Z3S7 1137 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 BRAPQ7Z569 592 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 TMEM150AQ86TG1 271 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 POMGNT1Q8WZA1 660 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 USP13Q92995 863 aaPredicted RBP18.52■□□□□ 0.56
SMG9-210ENST00000600097 EXOC4Q96A65 974 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 EBF3Q9H4W6 596 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 SMC3Q9UQE7 1217 aa18.52■□□□□ 0.56
SMG9-210ENST00000600097 TSC2P49815 1807 aa18.51■□□□□ 0.55
SMG9-210ENST00000600097 AKAP3O75969 853 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms