RNA–Protein interactions for RNA: ENST00000598428.2

AC016885.3-201, humanhuman

BASIC

Gene AC016885.3, Length 258 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016885.3-201ENST00000598428 FGFR4P22455 802 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 CXCR5P32302 372 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 CDH5P33151 784 aaPredicted RBP11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 NSFP46459 744 aaKnown RBP11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 NOMO3P69849 1222 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 FAM189BP81408 668 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 PPP2R5EQ16537 467 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 SLC10A6Q3KNW5 377 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 MAP9Q49MG5 647 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 TMEM270Q6UE05 265 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 MON1BQ7L1V2 547 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 HERC6Q8IVU3 1022 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 MCOLN2Q8IZK6 566 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 CEP120Q8N960 986 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 C1orf127Q8N9H9 656 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 EIF1ADQ8N9N8 165 aaKnown RBP11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 TOP1MTQ969P6 601 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 ACAP3Q96P50 834 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 PNKPQ96T60 521 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 NAP1L3Q99457 506 aaPredicted RBP11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 PBX4Q9BYU1 374 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 CHST12Q9NRB3 414 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 CISHQ9NSE2 258 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 ZNF446Q9NWS9 450 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 SIX4Q9UIU6 781 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 PCDHGC3Q9UN70 934 aa11.73□□□□□ -0.53
AC016885.3-201ENST00000598428 MICAL3Q7RTP6 2002 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 C9IYK1 514 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 DDX3YO15523 660 aaKnown RBP11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 CLSTN1O94985 981 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 GJB5O95377 273 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 NFICP08651 508 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 RHOXF2BP0C7M4 288 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 CTNNA2P26232 953 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 SLC1A1P43005 524 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 TNNC1P63316 161 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 TMEM132DQ14C87 1099 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 ZNF667Q5HYK9 610 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 LIN9Q5TKA1 542 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 TMCO2Q7Z6W1 182 aaPredicted RBP11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 DNAAF5Q86Y56 855 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 UBL4BQ8N7F7 174 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 ZNF564Q8TBZ8 553 aaPredicted RBP11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 CD101Q93033 1021 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 ZNF653Q96CK0 615 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 FAM212AQ96EL1 285 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 FAM84AQ96KN4 292 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 ADAM2Q99965 735 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 NUP85Q9BW27 656 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 TRAIPQ9BWF2 469 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 ACP6Q9NPH0 428 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 CNOT8Q9UFF9 292 aaKnown RBP11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 ALG6Q9Y672 507 aa11.72□□□□□ -0.53
AC016885.3-201ENST00000598428 CCDC66A2RUB6 948 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 MED7O43513 233 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 MAN1A1P33908 653 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 CTNNA1P35221 906 aaKnown RBP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 PBX2P40425 430 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 RABGGTBP53611 331 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 VSNL1P62760 191 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 RBP5P82980 135 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 HTRA4P83105 476 aaPredicted RBP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 C2orf54Q08AI8 447 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 INCA1Q0VD86 236 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 RAB30Q15771 203 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 JADE1Q6IE81 842 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 CATSPER4Q7RTX7 472 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 TMEM192Q8IY95 271 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 ZNF606Q8WXB4 792 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 MS4A14Q96JA4 679 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 SNX27Q96L92 541 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 PSMB7Q99436 277 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 ZSWIM1Q9BR11 485 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 LHX5Q9H2C1 402 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 EPC1Q9H2F5 836 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 SLITRK6Q9H5Y7 841 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 MRPL47Q9HD33 250 aaKnown RBP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 RBM12Q9NTZ6 932 aaKnown RBP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 KIAA1257Q9ULG3 409 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 PACSIN2Q9UNF0 486 aaPredicted RBP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 YBX2Q9Y2T7 364 aaKnown RBP11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 SCINQ9Y6U3 715 aa11.71□□□□□ -0.53
AC016885.3-201ENST00000598428 TTC3P53804 2025 aa11.7□□□□□ -0.54
AC016885.3-201ENST00000598428 PTPRSQ13332 1948 aa11.7□□□□□ -0.54
AC016885.3-201ENST00000598428 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms