RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 DDX23Q9BUQ8 820 aaKnown RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 TRMT61BQ9BVS5 477 aaKnown RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 TRPV4Q9HBA0 871 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 ZNF334Q9HCZ1 680 aaPredicted RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 TMLHEQ9NVH6 421 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 USP25Q9UHP3 1055 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 HPSEQ9Y251 543 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 UBE4BO95155 1302 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 PTPRJQ12913 1337 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
LIG1-215ENST00000597901 KANSL1LA0AUZ9 987 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 GFRA3O60609 400 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 CST3P01034 146 aaPredicted RBP16.2■□□□□ 0.18
LIG1-215ENST00000597901 DCNP07585 359 aaKnown RBP16.2■□□□□ 0.18
LIG1-215ENST00000597901 CYP2J2P51589 502 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 TSPY1Q01534 308 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 MYO1EQ12965 1108 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 STK4Q13043 487 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 PSMD2Q13200 908 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 SOWAHAQ2M3V2 549 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 GAREM2Q75VX8 874 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 DPH6Q7L8W6 267 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 OSTM1Q86WC4 334 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 WDR49Q8IV35 697 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 TOP6BLQ8N6T0 577 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 GIPC2Q8TF65 315 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 HPDLQ96IR7 371 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 LPIN3Q9BQK8 851 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 FOXQ1Q9C009 403 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 ATXN3LQ9H3M9 355 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
LIG1-215ENST00000597901 PCDHB5Q9Y5E4 795 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 ATP6V1DQ9Y5K8 247 aa16.2■□□□□ 0.18
LIG1-215ENST00000597901 GABRDO14764 452 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 FGF19O95750 216 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 DLATP10515 647 aaKnown RBP16.19■□□□□ 0.18
LIG1-215ENST00000597901 PSMC3P17980 439 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 ATF6P18850 670 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 TNNI1P19237 187 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 CD72P21854 359 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 ACAT1P24752 427 aaKnown RBP16.19■□□□□ 0.18
LIG1-215ENST00000597901 GABRR2P28476 465 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 LHX1P48742 406 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 MYL7Q01449 175 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 CYP24A1Q07973 514 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 GRM2Q14416 872 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 PSMD6Q15008 389 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
LIG1-215ENST00000597901 KMT5BQ4FZB7 885 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 VITQ6UXI7 678 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 LIMS2Q7Z4I7 341 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 GPIHBP1Q8IV16 184 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 MFSD6LQ8IWD5 586 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 C12orf56Q8IXR9 622 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 ZNF516Q92618 1163 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 CCDC127Q96BQ5 260 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 FNBP1Q96RU3 617 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 SLITRK6Q9H5Y7 841 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 BRD9Q9H8M2 597 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 ABI2Q9NYB9 513 aaPredicted RBP16.19■□□□□ 0.18
LIG1-215ENST00000597901 DLGAP2Q9P1A6 1054 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 GTF3C4Q9UKN8 822 aa16.19■□□□□ 0.18
LIG1-215ENST00000597901 MTF2Q9Y483 593 aaPredicted RBP16.19■□□□□ 0.18
LIG1-215ENST00000597901 KMT2EQ8IZD2 1858 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 FAM237AA0A1B0GTK4 181 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 FAM170BA6NMN3 283 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 HEPACAM2A8MVW5 462 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 LRRN2O75325 713 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 PRPF40AO75400 957 aaKnown RBP16.18■□□□□ 0.18
LIG1-215ENST00000597901 GDI1P31150 447 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 SYKP43405 635 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 NDUFA8P51970 172 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 VEPH1Q14D04 833 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 ANGPT1Q15389 498 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 TAF12Q16514 161 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 INTS6LQ5JSJ4 861 aaKnown RBP16.18■□□□□ 0.18
LIG1-215ENST00000597901 STXBP5Q5T5C0 1151 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 ARID3BQ8IVW6 561 aaPredicted RBP16.18■□□□□ 0.18
LIG1-215ENST00000597901 PJA1Q8NG27 643 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 E2F7Q96AV8 911 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 NELL2Q99435 816 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 PI4K2AQ9BTU6 479 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 MKNK1Q9BUB5 465 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 SCAND2PQ9GZW5 306 aaPredicted RBP16.18■□□□□ 0.18
LIG1-215ENST00000597901 IL21Q9HBE4 155 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 HEBP1Q9NRV9 189 aa16.18■□□□□ 0.18
LIG1-215ENST00000597901 MYBPHLA2RUH7 354 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 HCRTO43612 131 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 EXOC3O60645 756 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 MYL1P05976 194 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 GLULP15104 373 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 LMO2P25791 158 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 GPR158Q5T848 1215 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 ADGRF2Q8IZF7 708 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 KIAA0895Q8NCT3 520 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 GOLGA5Q8TBA6 731 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 DEPDC1BQ8WUY9 529 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms